Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 AC016632.1-201ENST00000503994 196 ntBASIC1.72□□□□□ -2.13
LRRK1Q38SD2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRK1Q38SD2 MTND4LP26-201ENST00000518144 282 ntBASIC1.72□□□□□ -2.13
LRRK1Q38SD2 AC087441.2-201ENST00000529141 262 ntBASIC1.72□□□□□ -2.13
LRRK1Q38SD2 AC018630.3-201ENST00000542637 96 ntBASIC1.72□□□□□ -2.13
LRRK1Q38SD2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.72□□□□□ -2.13
LRRK1Q38SD2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LRRK1Q38SD2 Y_RNA.339-201ENST00000365325 102 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RNU6-245P-201ENST00000384020 107 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRRK1Q38SD2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LRRK1Q38SD2 Y_RNA.597-201ENST00000410463 100 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RNA5SP489-201ENST00000410986 109 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRK1Q38SD2 MTND1P4-201ENST00000435196 415 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AL353689.1-201ENST00000438895 199 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AC104564.1-201ENST00000493028 407 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AC090255.1-201ENST00000495779 349 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 Y_RNA.670-201ENST00000516255 105 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RNA5SP490-201ENST00000517141 136 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AP005639.2-201ENST00000527592 928 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 MIR5696-201ENST00000578474 85 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 MIR3923-201ENST00000579521 83 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AC018638.8-201ENST00000588755 281 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRK1Q38SD2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRK1Q38SD2 TPTEP1-208ENST00000636884 213 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RNU6-593P-201ENST00000364716 112 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 MIR561-201ENST00000385216 97 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RNA5SP219-201ENST00000390940 113 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AL139396.1-201ENST00000421137 167 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 C8orf59P1-201ENST00000429930 303 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AL031659.1-201ENST00000447075 539 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RNU7-95P-201ENST00000459222 64 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 AC007547.1-201ENST00000462177 490 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RNU6-965P-201ENST00000516721 96 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 MIR3942-201ENST00000585264 109 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RPL30P11-203ENST00000598995 310 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 SCARNA4-201ENST00000629045 128 ntBASIC1.71□□□□□ -2.14
LRRK1Q38SD2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRK1Q38SD2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 CBX3P1-201ENST00000325243 554 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 SNORA3A-201ENST00000364113 130 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 Y_RNA.279-201ENST00000364763 95 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 Y_RNA.373-201ENST00000365600 103 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 UBE2V1P4-201ENST00000425374 344 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 AC107953.1-201ENST00000522216 297 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 AC022616.8-201ENST00000533569 253 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.7□□□□□ -2.14
LRRK1Q38SD2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LRRK1Q38SD2 Y_RNA.122-201ENST00000363331 96 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AL590556.1-201ENST00000423231 483 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC009238.1-201ENST00000442165 424 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC009237.6-201ENST00000446969 424 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRK1Q38SD2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC109446.1-201ENST00000566172 220 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC026271.5-201ENST00000577873 130 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC009994.1-201ENST00000606889 253 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.69□□□□□ -2.14
LRRK1Q38SD2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LRRK1Q38SD2 RNU6-438P-201ENST00000365561 103 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 Y_RNA.540-201ENST00000384638 111 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 MIR29C-201ENST00000385231 88 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 SNORA40.19-201ENST00000390846 128 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC243428.1-201ENST00000421099 264 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC114801.2-201ENST00000503825 781 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC116353.2-201ENST00000505332 712 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC115990.1-201ENST00000526957 301 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC005668.1-201ENST00000571142 476 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AL450472.1-202ENST00000637286 180 ntBASIC1.69□□□□□ -2.14
LRRK1Q38SD2 AC233981.2-201ENST00000611524 1614 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.68□□□□□ -2.14
LRRK1Q38SD2 SNORA67.1-201ENST00000364749 141 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LRRK1Q38SD2 Y_RNA.490-201ENST00000384413 102 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 MIR1276-201ENST00000408707 83 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 RNU2-48P-201ENST00000410694 191 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 RPL30P16-201ENST00000419341 429 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.68□□□□□ -2.14
LRRK1Q38SD2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.68□□□□□ -2.14
LRRK1Q38SD2 MIR3126-201ENST00000577443 74 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 MIR4287-201ENST00000579398 78 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 AL138726.1-201ENST00000614873 333 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 AC104260.1-201ENST00000616660 539 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 AC022306.2-201ENST00000617563 647 ntBASIC1.68□□□□□ -2.14
LRRK1Q38SD2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRK1Q38SD2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms