Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU7-66P-201ENST00000459469 62 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 TOMM22P6-201ENST00000465035 409 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 FO393415.2-201ENST00000480085 343 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 AC132942.1-201ENST00000486753 483 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.43□□□□□ -2.18
RFX4Q33E94 RNVU1-2-201ENST00000516326 135 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 RNU6-314P-201ENST00000516574 104 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.43□□□□□ -2.18
RFX4Q33E94 MIR3198-2-201ENST00000577868 80 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 CPDP1-201ENST00000579660 283 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.43□□□□□ -2.18
RFX4Q33E94 AC011494.1-201ENST00000596454 237 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.43□□□□□ -2.18
RFX4Q33E94 RMST_3.1-201ENST00000611651 109 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 DISC2.1-201ENST00000612827 205 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.43□□□□□ -2.18
RFX4Q33E94 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RFX4Q33E94 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 MTND5P10-201ENST00000603719 1809 ntBASIC1.43□□□□□ -2.18
RFX4Q33E94 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RFX4Q33E94 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
RFX4Q33E94 SNORD113-7-201ENST00000363762 77 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 SNORA29-201ENST00000384183 140 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 Y_RNA.554-201ENST00000384672 102 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 RNU6-1106P-201ENST00000390845 107 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 MIR450B-201ENST00000401182 78 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.42□□□□□ -2.18
RFX4Q33E94 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.42□□□□□ -2.18
RFX4Q33E94 SNRPEP8-201ENST00000442866 260 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 FTH1P25-201ENST00000447665 469 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.42□□□□□ -2.18
RFX4Q33E94 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.42□□□□□ -2.18
RFX4Q33E94 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.42□□□□□ -2.18
RFX4Q33E94 MRPS36P4-201ENST00000534436 298 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 AC016957.1-201ENST00000534895 309 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.42□□□□□ -2.18
RFX4Q33E94 AC100830.2-201ENST00000581636 240 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.42□□□□□ -2.18
RFX4Q33E94 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.42□□□□□ -2.18
RFX4Q33E94 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
RFX4Q33E94 AL022345.1-201ENST00000607292 135 ntBASIC1.42□□□□□ -2.18
RFX4Q33E94 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.42□□□□□ -2.18
RFX4Q33E94 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RFX4Q33E94 LINC02555-201ENST00000563933 1951 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU1-76P-201ENST00000362903 159 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU5B-2P-201ENST00000363036 113 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU6-1252P-201ENST00000363054 104 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU6-23P-201ENST00000363283 107 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 Y_RNA.123-201ENST00000363338 102 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 Y_RNA.373-201ENST00000365600 103 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU6-160P-201ENST00000384591 107 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 SNORA26.9-201ENST00000391322 122 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AL627390.1-201ENST00000396055 340 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AC009310.1-201ENST00000414414 451 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AC123900.1-201ENST00000420390 96 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.41□□□□□ -2.18
RFX4Q33E94 AL035666.1-201ENST00000446195 348 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU7-187P-201ENST00000458985 68 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AC116337.1-201ENST00000509680 687 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 SNORA25.15-201ENST00000516487 89 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 RNU6-567P-201ENST00000516746 107 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RFX4Q33E94 TPRKBP2-201ENST00000565969 475 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.41□□□□□ -2.18
RFX4Q33E94 AC016925.2-201ENST00000605108 242 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
RFX4Q33E94 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.41□□□□□ -2.18
RFX4Q33E94 AC024614.3-201ENST00000637860 256 ntBASIC1.41□□□□□ -2.18
RFX4Q33E94 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
RFX4Q33E94 Y_RNA.3-201ENST00000362331 103 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 RNU6-623P-201ENST00000363143 105 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 SNORA32.2-201ENST00000384049 122 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 RNU6-214P-201ENST00000384130 107 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 SNORD116-4-201ENST00000384733 96 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 MIR549A-201ENST00000385268 96 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.4□□□□□ -2.19
RFX4Q33E94 UBE2V1P4-201ENST00000425374 344 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.4□□□□□ -2.19
RFX4Q33E94 MTND3P21-201ENST00000433774 331 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.4□□□□□ -2.19
RFX4Q33E94 U8.21-201ENST00000459536 136 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.4□□□□□ -2.19
RFX4Q33E94 RNU6-720P-201ENST00000516363 108 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.4□□□□□ -2.19
RFX4Q33E94 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.4□□□□□ -2.19
RFX4Q33E94 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.4□□□□□ -2.19
RFX4Q33E94 AC090517.1-201ENST00000569307 266 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 EIF1P4-201ENST00000572664 335 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 AC064807.4-201ENST00000607201 407 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.4□□□□□ -2.19
RFX4Q33E94 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
RFX4Q33E94 RNU6-1286P-201ENST00000383871 107 ntBASIC1.39□□□□□ -2.19
RFX4Q33E94 MIR504-201ENST00000385065 83 ntBASIC1.39□□□□□ -2.19
RFX4Q33E94 SNORA48.1-201ENST00000390879 135 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms