Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AP002782.1-201ENST00000623107 614 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 U4.7-201ENST00000638126 106 ntBASIC0.32□□□□□ -2.36
RFX7Q2KHR2 RNU6-105P-201ENST00000363909 104 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 RNU6-43P-201ENST00000384302 107 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 Y_RNA.472-201ENST00000384322 102 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 RNU6-298P-201ENST00000390888 96 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AC010975.2-201ENST00000427781 588 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AC245047.7-201ENST00000440265 293 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AC243964.1-201ENST00000441814 261 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AL360271.2-201ENST00000447710 161 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AL049829.1-201ENST00000465411 156 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AC105758.1-201ENST00000506038 399 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AC112206.4-201ENST00000515142 405 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 RNU6-947P-201ENST00000516264 106 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 MTATP6P15-201ENST00000527233 835 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 EIF4A1P12-201ENST00000551910 141 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.31□□□□□ -2.36
RFX7Q2KHR2 TMF1P1-201ENST00000576058 373 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AC105148.1-201ENST00000604961 409 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AP002360.4-201ENST00000606980 481 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 AL353149.1-201ENST00000610667 244 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 PCGEM1.1-201ENST00000613431 131 ntBASIC0.31□□□□□ -2.36
RFX7Q2KHR2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.3□□□□□ -2.36
RFX7Q2KHR2 RNU6-534P-201ENST00000364877 106 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 RNA5SP299-201ENST00000391203 116 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 RPS20P2-201ENST00000402520 389 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AL353777.1-201ENST00000425552 326 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC078809.1-201ENST00000427601 140 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 RNA5SP255-201ENST00000516370 107 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 RNU6-922P-201ENST00000516753 99 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC007834.2-201ENST00000536310 343 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC090888.2-201ENST00000559765 1144 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC090517.1-201ENST00000569307 266 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC012557.2-201ENST00000605919 418 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.3□□□□□ -2.36
RFX7Q2KHR2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC006386.1-201ENST00000619436 415 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 SNORD3E-202ENST00000627253 216 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 MIR338-201ENST00000636369 67 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 MIR6086-201ENST00000638065 55 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 AC006927.4-201ENST00000639187 543 ntBASIC0.3□□□□□ -2.36
RFX7Q2KHR2 SNORD56.2-201ENST00000363242 71 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 RNU6-371P-201ENST00000364283 108 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 RNA5SP201-201ENST00000410316 124 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AC114491.1-201ENST00000416095 246 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.29□□□□□ -2.36
RFX7Q2KHR2 RPL22P17-201ENST00000438729 315 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.29□□□□□ -2.36
RFX7Q2KHR2 RNU6-1146P-201ENST00000516282 102 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 RNU6-201P-201ENST00000517100 61 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AC107934.1-201ENST00000522215 217 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AL929325.1-201ENST00000603096 117 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AL353765.1-201ENST00000605514 183 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 GHRLOS.1-201ENST00000610995 70 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AC021506.2-201ENST00000612354 169 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 PART1_2.1-201ENST00000612397 250 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 AC136475.10-201ENST00000620253 385 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
RFX7Q2KHR2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
RFX7Q2KHR2 MIR32-201ENST00000384965 70 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 RNA5SP323-201ENST00000391094 133 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AF228730.1-201ENST00000397972 663 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.28□□□□□ -2.36
RFX7Q2KHR2 USP9YP28-201ENST00000435142 589 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 MTCO3P18-201ENST00000440206 761 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AL162395.1-201ENST00000457882 422 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AC091435.1-201ENST00000505442 584 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 MTCO3P7-201ENST00000510008 774 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.28□□□□□ -2.36
RFX7Q2KHR2 RNU2-34P-201ENST00000516534 121 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 RNU6-567P-201ENST00000516746 107 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.28□□□□□ -2.36
RFX7Q2KHR2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.28□□□□□ -2.36
RFX7Q2KHR2 CTHRC1P1-201ENST00000605383 469 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AL157786.1-207ENST00000627771 695 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 MIR6759-201ENST00000638110 65 ntBASIC0.28□□□□□ -2.36
RFX7Q2KHR2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.28□□□□□ -2.36
RFX7Q2KHR2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
RFX7Q2KHR2 BX322639.1-202ENST00000423987 2213 ntBASIC0.28□□□□□ -2.37
RFX7Q2KHR2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AC092268.1-201ENST00000342691 405 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RNU6-545P-201ENST00000362681 104 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RNU1-76P-201ENST00000362903 159 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RNU6-378P-201ENST00000384324 107 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RNU6-45P-201ENST00000384471 107 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 MIR300-201ENST00000401138 83 ntBASIC0.27□□□□□ -2.37
RFX7Q2KHR2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms