Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AL365184.2-201ENST00000431139 435 ntBASIC0.71□□□□□ -2.3
USF2Q15853 HMGN2P34-201ENST00000437647 269 ntBASIC0.71□□□□□ -2.3
USF2Q15853 AC092991.1-201ENST00000477176 376 ntBASIC0.71□□□□□ -2.3
USF2Q15853 AC008628.2-201ENST00000502605 298 ntBASIC0.71□□□□□ -2.3
USF2Q15853 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.71□□□□□ -2.3
USF2Q15853 MTCO3P7-201ENST00000510008 774 ntBASIC0.71□□□□□ -2.3
USF2Q15853 RNU6-113P-201ENST00000516653 101 ntBASIC0.71□□□□□ -2.3
USF2Q15853 RNU6-922P-201ENST00000516753 99 ntBASIC0.71□□□□□ -2.3
USF2Q15853 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.71□□□□□ -2.3
USF2Q15853 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.71□□□□□ -2.3
USF2Q15853 MIR4999-201ENST00000585029 91 ntBASIC0.71□□□□□ -2.3
USF2Q15853 MTCO2P2-201ENST00000591258 225 ntBASIC0.71□□□□□ -2.3
USF2Q15853 AC008751.2-201ENST00000597885 980 ntBASIC0.71□□□□□ -2.3
USF2Q15853 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.71□□□□□ -2.3
USF2Q15853 AC009159.2-201ENST00000617603 606 ntBASIC0.71□□□□□ -2.3
USF2Q15853 AC138649.3-201ENST00000622154 254 ntBASIC0.71□□□□□ -2.3
USF2Q15853 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
USF2Q15853 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
USF2Q15853 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
USF2Q15853 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
USF2Q15853 SNORD114-27-201ENST00000363766 70 ntBASIC0.7□□□□□ -2.3
USF2Q15853 RNU6-827P-201ENST00000365553 106 ntBASIC0.7□□□□□ -2.3
USF2Q15853 RNU6-417P-201ENST00000384712 107 ntBASIC0.7□□□□□ -2.3
USF2Q15853 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
USF2Q15853 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AL117339.3-201ENST00000418733 162 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC012306.1-201ENST00000423267 114 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AL009048.1-201ENST00000450437 298 ntBASIC0.7□□□□□ -2.3
USF2Q15853 RPS27P1-201ENST00000450552 247 ntBASIC0.7□□□□□ -2.3
USF2Q15853 Y_RNA.672-201ENST00000516289 104 ntBASIC0.7□□□□□ -2.3
USF2Q15853 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC005771.1-201ENST00000585581 349 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
USF2Q15853 AC138749.5-201ENST00000611461 208 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC005520.5-201ENST00000613926 164 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC027807.2-201ENST00000616099 408 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC116165.2-201ENST00000616705 206 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC009509.4-201ENST00000619202 509 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.7□□□□□ -2.3
USF2Q15853 AC009878.1-201ENST00000621819 340 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC006001.4-201ENST00000622243 395 ntBASIC0.7□□□□□ -2.3
USF2Q15853 AC106754.2-201ENST00000623006 233 ntBASIC0.7□□□□□ -2.3
USF2Q15853 RNU6-562P-201ENST00000362731 107 ntBASIC0.69□□□□□ -2.3
USF2Q15853 RNU6-950P-201ENST00000384651 107 ntBASIC0.69□□□□□ -2.3
USF2Q15853 MIR515-2-201ENST00000384883 83 ntBASIC0.69□□□□□ -2.3
USF2Q15853 MIR515-1-201ENST00000384884 83 ntBASIC0.69□□□□□ -2.3
USF2Q15853 AL008987.1-201ENST00000415528 237 ntBASIC0.69□□□□□ -2.3
USF2Q15853 MTCYBP1-201ENST00000454315 1119 ntBASIC0.69□□□□□ -2.3
USF2Q15853 UBE2V1P12-201ENST00000503954 474 ntBASIC0.69□□□□□ -2.3
USF2Q15853 AC010486.2-201ENST00000505572 483 ntBASIC0.69□□□□□ -2.3
USF2Q15853 RNU6-948P-201ENST00000516374 107 ntBASIC0.69□□□□□ -2.3
USF2Q15853 DEFB131C-201ENST00000528817 165 ntBASIC0.69□□□□□ -2.3
USF2Q15853 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.69□□□□□ -2.3
USF2Q15853 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.69□□□□□ -2.3
USF2Q15853 AL121579.1-201ENST00000555129 305 ntBASIC0.69□□□□□ -2.3
USF2Q15853 MIR6857-201ENST00000613267 93 ntBASIC0.69□□□□□ -2.3
USF2Q15853 AL136221.1-201ENST00000621449 509 ntBASIC0.69□□□□□ -2.3
USF2Q15853 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.69□□□□□ -2.3
USF2Q15853 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
USF2Q15853 MTND4P9-201ENST00000507819 1346 ntBASIC0.68□□□□□ -2.3
USF2Q15853 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
USF2Q15853 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
USF2Q15853 RNU6-1031P-201ENST00000384773 107 ntBASIC0.68□□□□□ -2.3
USF2Q15853 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
USF2Q15853 RPS26P5-201ENST00000418544 335 ntBASIC0.68□□□□□ -2.3
USF2Q15853 RAP1BP2-201ENST00000478270 544 ntBASIC0.68□□□□□ -2.3
USF2Q15853 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.68□□□□□ -2.3
USF2Q15853 RNU6-1146P-201ENST00000516282 102 ntBASIC0.68□□□□□ -2.3
USF2Q15853 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.68□□□□□ -2.3
USF2Q15853 AL590705.4-201ENST00000532209 134 ntBASIC0.68□□□□□ -2.3
USF2Q15853 CBX3P8-201ENST00000532412 525 ntBASIC0.68□□□□□ -2.3
USF2Q15853 AC109446.2-201ENST00000567872 497 ntBASIC0.68□□□□□ -2.3
USF2Q15853 MIR5695-201ENST00000579717 85 ntBASIC0.68□□□□□ -2.3
USF2Q15853 FAM106DP-201ENST00000586416 501 ntBASIC0.68□□□□□ -2.3
USF2Q15853 AC022432.1-201ENST00000595739 310 ntBASIC0.68□□□□□ -2.3
USF2Q15853 AC011155.2-201ENST00000623202 216 ntBASIC0.68□□□□□ -2.3
USF2Q15853 AP002371.2-201ENST00000624450 503 ntBASIC0.68□□□□□ -2.3
USF2Q15853 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
USF2Q15853 MIR96-201ENST00000362288 78 ntBASIC0.67□□□□□ -2.3
USF2Q15853 RNU5F-7P-201ENST00000363696 115 ntBASIC0.67□□□□□ -2.3
USF2Q15853 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
USF2Q15853 Y_RNA.508-201ENST00000384502 114 ntBASIC0.67□□□□□ -2.3
USF2Q15853 RNU6-1235P-201ENST00000384559 107 ntBASIC0.67□□□□□ -2.3
USF2Q15853 MIR200A-201ENST00000384875 90 ntBASIC0.67□□□□□ -2.3
USF2Q15853 MIR532-201ENST00000385025 91 ntBASIC0.67□□□□□ -2.3
USF2Q15853 SNORD12-201ENST00000391002 90 ntBASIC0.67□□□□□ -2.3
USF2Q15853 RNA5SP467-201ENST00000391274 118 ntBASIC0.67□□□□□ -2.3
USF2Q15853 MIR1253-201ENST00000408273 105 ntBASIC0.67□□□□□ -2.3
USF2Q15853 MTCO2P23-201ENST00000425216 680 ntBASIC0.67□□□□□ -2.3
USF2Q15853 AL162395.1-201ENST00000457882 422 ntBASIC0.67□□□□□ -2.3
USF2Q15853 RNU6-498P-201ENST00000459468 107 ntBASIC0.67□□□□□ -2.3
USF2Q15853 AC105758.1-201ENST00000506038 399 ntBASIC0.67□□□□□ -2.3
USF2Q15853 FABP5P5-201ENST00000515537 406 ntBASIC0.67□□□□□ -2.3
USF2Q15853 Z99497.2-201ENST00000603634 310 ntBASIC0.67□□□□□ -2.3
USF2Q15853 AC112191.3-201ENST00000604371 277 ntBASIC0.67□□□□□ -2.3
USF2Q15853 AP001836.1-201ENST00000604675 523 ntBASIC0.67□□□□□ -2.3
USF2Q15853 AC104458.1-201ENST00000608243 463 ntBASIC0.67□□□□□ -2.3
USF2Q15853 AL133173.2-201ENST00000614270 90 ntBASIC0.67□□□□□ -2.3
USF2Q15853 MIR6734-201ENST00000621166 68 ntBASIC0.67□□□□□ -2.3
USF2Q15853 AL078595.3-201ENST00000623815 1166 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms