Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.13□□□□□ -1.91
SF3B3Q15393 AC233981.2-201ENST00000611524 1614 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 Z75746.1-201ENST00000440243 2080 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SF3B3Q15393 RNU1-76P-201ENST00000362903 159 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 Y_RNA.288-201ENST00000364854 92 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 RNU4-9P-201ENST00000364951 139 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 Y_RNA.358-201ENST00000365491 99 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 Y_RNA.376-201ENST00000365638 108 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 SNORD116-20-201ENST00000384529 92 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AL359511.1-201ENST00000402970 211 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AL590004.2-201ENST00000404787 371 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 RNU4-53P-201ENST00000410828 140 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 RNU6-130P-201ENST00000411112 103 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AL590556.1-201ENST00000423231 483 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.12□□□□□ -1.91
SF3B3Q15393 Z82188.1-201ENST00000436709 154 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 HMGN2P10-201ENST00000448085 265 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AC107032.1-201ENST00000485945 480 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AC132942.1-201ENST00000486753 483 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 YWHAEP4-201ENST00000505390 198 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 Y_RNA.706-201ENST00000516933 99 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AL442163.3-201ENST00000554110 156 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AL391261.3-201ENST00000557194 520 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.12□□□□□ -1.91
SF3B3Q15393 AC010928.2-201ENST00000588017 287 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 SCARNA4-201ENST00000629045 128 ntBASIC3.12□□□□□ -1.91
SF3B3Q15393 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.12□□□□□ -1.91
SF3B3Q15393 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SF3B3Q15393 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SF3B3Q15393 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SF3B3Q15393 OR56A5-201ENST00000340110 738 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 Y_RNA.19-201ENST00000362462 99 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 U3.13-201ENST00000364804 214 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 SNORD32A-201ENST00000364805 84 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 Y_RNA.458-201ENST00000384240 102 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 Y_RNA.483-201ENST00000384380 101 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SF3B3Q15393 FTH1P15-201ENST00000406984 280 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 MIR1302-6-201ENST00000408466 90 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.11□□□□□ -1.91
SF3B3Q15393 AC074117.2-201ENST00000417130 397 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.11□□□□□ -1.91
SF3B3Q15393 BPY2DP-201ENST00000422208 265 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 RPL23AP95-201ENST00000426806 265 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 AC007969.2-201ENST00000441891 191 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 RPL26P9-201ENST00000457466 433 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 snoU13.30-201ENST00000458951 104 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 RPL30P1-201ENST00000488676 339 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 RPL23AP75-201ENST00000491601 451 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.11□□□□□ -1.91
SF3B3Q15393 AC025465.3-201ENST00000510570 311 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 SNORA40.15-201ENST00000516884 107 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 AC091144.1-201ENST00000519573 138 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 NACAP3-201ENST00000552100 481 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.11□□□□□ -1.91
SF3B3Q15393 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.11□□□□□ -1.91
SF3B3Q15393 AC024581.2-201ENST00000619986 252 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 AC130454.1-201ENST00000622948 401 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.11□□□□□ -1.91
SF3B3Q15393 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SF3B3Q15393 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SF3B3Q15393 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 Y_RNA.105-201ENST00000363182 111 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 Y_RNA.183-201ENST00000363882 113 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.1□□□□□ -1.91
SF3B3Q15393 RNU6-1286P-201ENST00000383871 107 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 RNU6-968P-201ENST00000384076 107 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 Y_RNA.447-201ENST00000384184 113 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 Y_RNA.518-201ENST00000384552 113 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 MIR592-201ENST00000384959 97 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.1□□□□□ -1.91
SF3B3Q15393 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.1□□□□□ -1.91
SF3B3Q15393 Z98742.3-201ENST00000418637 326 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.1□□□□□ -1.91
SF3B3Q15393 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.1□□□□□ -1.91
SF3B3Q15393 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.1□□□□□ -1.91
SF3B3Q15393 LINC01399-202ENST00000458450 244 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 SNORD127-201ENST00000458892 86 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 U8.22-201ENST00000459141 133 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 snoU13.28-201ENST00000459235 104 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 TOMM22P6-201ENST00000465035 409 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 RN7SL499P-201ENST00000481141 276 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 MRPL42P6-201ENST00000486397 371 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 AC010469.2-201ENST00000496412 480 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 RN7SL636P-201ENST00000497504 294 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 ANXA2P1-201ENST00000505539 926 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 AC091874.1-201ENST00000511402 339 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 AC067942.3-201ENST00000512025 362 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 MIR2355-201ENST00000517199 87 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.1□□□□□ -1.91
SF3B3Q15393 AL356157.2-201ENST00000605122 111 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.1□□□□□ -1.91
SF3B3Q15393 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SF3B3Q15393 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SF3B3Q15393 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.09□□□□□ -1.91
SF3B3Q15393 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms