Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 AC011603.4-201ENST00000611325 277 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1H3Q13133 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H3Q13133 MIR6844-201ENST00000637122 62 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H3Q13133 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H3Q13133 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H3Q13133 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1H3Q13133 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.28□□□□□ -1.72
NR1H3Q13133 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H3Q13133 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H3Q13133 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.27□□□□□ -1.73
NR1H3Q13133 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H3Q13133 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NR1H3Q13133 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NR1H3Q13133 RNU1-89P-201ENST00000384592 164 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 MIR29B2-201ENST00000385055 81 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 MIR873-201ENST00000401120 77 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 RNU6-383P-201ENST00000410864 94 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 Z98742.2-201ENST00000431564 187 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 HMGN2P31-201ENST00000432430 273 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 HMGN2P9-201ENST00000476875 229 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.27□□□□□ -1.73
NR1H3Q13133 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.27□□□□□ -1.73
NR1H3Q13133 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.27□□□□□ -1.73
NR1H3Q13133 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.27□□□□□ -1.73
NR1H3Q13133 MIR92B-201ENST00000607575 96 ntBASIC4.27□□□□□ -1.73
NR1H3Q13133 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.27□□□□□ -1.73
NR1H3Q13133 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H3Q13133 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.27□□□□□ -1.73
NR1H3Q13133 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H3Q13133 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H3Q13133 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H3Q13133 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H3Q13133 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NR1H3Q13133 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NR1H3Q13133 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NR1H3Q13133 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H3Q13133 Y_RNA.124-201ENST00000363339 93 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 SNORD32B-201ENST00000364460 84 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 RNU6-80P-201ENST00000384195 107 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 MIR767-201ENST00000390228 109 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NR1H3Q13133 RNU6ATAC-201ENST00000408749 126 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 SNORA36B-201ENST00000410438 131 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NR1H3Q13133 RPL23AP7-203ENST00000449021 469 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 CENPBD1P1-201ENST00000464061 469 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 AC146944.2-203ENST00000502493 354 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 AC139495.1-202ENST00000513164 354 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 RNU6-561P-201ENST00000516222 102 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 RNU7-115P-201ENST00000516433 55 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 RNU1-45P-201ENST00000517191 141 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.26□□□□□ -1.73
NR1H3Q13133 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.26□□□□□ -1.73
NR1H3Q13133 RPL30P11-203ENST00000598995 310 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 AC090517.3-201ENST00000625170 141 ntBASIC4.26□□□□□ -1.73
NR1H3Q13133 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1H3Q13133 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.26□□□□□ -1.73
NR1H3Q13133 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H3Q13133 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H3Q13133 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H3Q13133 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.25□□□□□ -1.73
NR1H3Q13133 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.25□□□□□ -1.73
NR1H3Q13133 RNA5SP322-201ENST00000363617 119 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 AL035461.1-201ENST00000421490 332 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 EIF4EP4-201ENST00000424916 578 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.25□□□□□ -1.73
NR1H3Q13133 RPS27P1-201ENST00000450552 247 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 HSPE1P13-201ENST00000451143 297 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 RNU7-197P-201ENST00000458836 62 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.25□□□□□ -1.73
NR1H3Q13133 RNU6-919P-201ENST00000516731 104 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 MIR486-1-201ENST00000612171 68 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.25□□□□□ -1.73
NR1H3Q13133 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H3Q13133 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.25□□□□□ -1.73
NR1H3Q13133 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
NR1H3Q13133 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H3Q13133 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.24□□□□□ -1.73
NR1H3Q13133 RNU6-768P-201ENST00000384683 107 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 PTMAP2-201ENST00000397627 327 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 CYCSP19-201ENST00000411715 316 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 RPS29P7-201ENST00000439662 171 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 AL031183.1-201ENST00000457667 207 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 AC091153.1-201ENST00000466297 402 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.24□□□□□ -1.73
NR1H3Q13133 RNU6-1337P-201ENST00000516525 95 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 Y_RNA.686-201ENST00000516548 134 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 MIR3158-1-201ENST00000583596 81 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 MIR4753-201ENST00000585119 83 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 MIR6500-201ENST00000622700 86 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H3Q13133 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H3Q13133 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.24□□□□□ -1.73
NR1H3Q13133 AC000403.1-201ENST00000613696 3585 ntBASIC4.24□□□□□ -1.73
NR1H3Q13133 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms