Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC079587.1-201ENST00000603846 277 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 AC091152.3-201ENST00000604227 325 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 U6.73-201ENST00000619194 103 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 MIR6500-201ENST00000622700 86 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 AC006435.5-201ENST00000624486 112 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXC1Q12948 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXC1Q12948 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
FOXC1Q12948 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXC1Q12948 AC010680.1-201ENST00000590024 3590 ntBASIC4.17□□□□□ -1.74
FOXC1Q12948 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXC1Q12948 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXC1Q12948 AC008079.2-201ENST00000623543 20396 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
FOXC1Q12948 AC026241.1-201ENST00000517873 2142 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXC1Q12948 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
FOXC1Q12948 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 Y_RNA.298-201ENST00000364960 107 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 SNORD14D-201ENST00000384390 87 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
FOXC1Q12948 AC080013.2-201ENST00000460866 323 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 NDUFA4P2-201ENST00000489989 244 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 RNU6-1098P-201ENST00000516772 96 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 RNU6-1270P-201ENST00000517128 108 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 AC027419.1-201ENST00000522976 328 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 MIR3199-2-201ENST00000636243 86 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXC1Q12948 AC009093.8-201ENST00000641769 292 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
FOXC1Q12948 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
FOXC1Q12948 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 AP003122.5-201ENST00000527668 3766 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXC1Q12948 AC016588.2-201ENST00000632484 3021 ntBASIC4.16□□□□□ -1.74
FOXC1Q12948 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXC1Q12948 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXC1Q12948 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
FOXC1Q12948 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.15□□□□□ -1.74
FOXC1Q12948 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.15□□□□□ -1.74
FOXC1Q12948 SNORA33-201ENST00000363664 130 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 RNU6-1210P-201ENST00000363775 107 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 SNORD32B-201ENST00000364460 84 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 RNU6-219P-201ENST00000364728 107 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 RNU6-816P-201ENST00000390914 107 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 RNU6-1268P-201ENST00000391214 107 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 RNU6-1239P-201ENST00000391310 107 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 MIR1283-1-201ENST00000408494 87 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 RNU6-402P-201ENST00000410678 103 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 AC004941.2-201ENST00000427009 228 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 AC107626.1-201ENST00000471084 183 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 MRPS17P9-201ENST00000511924 393 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXC1Q12948 MIR5197-201ENST00000583721 112 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 AC012493.2-201ENST00000595083 291 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.15□□□□□ -1.75
FOXC1Q12948 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
FOXC1Q12948 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXC1Q12948 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
FOXC1Q12948 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXC1Q12948 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FOXC1Q12948 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXC1Q12948 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXC1Q12948 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
FOXC1Q12948 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
FOXC1Q12948 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXC1Q12948 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 SNORD115-13-201ENST00000363358 82 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 SNORD115-16-201ENST00000363887 82 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 SNORD115-1-201ENST00000364961 82 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 RNA5SP22-201ENST00000365393 109 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXC1Q12948 AC099522.1-202ENST00000514718 367 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 SUMO2P16-201ENST00000519475 264 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 MIR4660-201ENST00000583549 74 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 AC012531.4-201ENST00000616509 177 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.14□□□□□ -1.75
FOXC1Q12948 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
FOXC1Q12948 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXC1Q12948 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXC1Q12948 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FOXC1Q12948 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
FOXC1Q12948 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.13□□□□□ -1.75
FOXC1Q12948 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXC1Q12948 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXC1Q12948 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXC1Q12948 AL133243.3-201ENST00000617415 3004 ntBASIC4.13□□□□□ -1.75
FOXC1Q12948 RN7SL812P-201ENST00000493791 279 ntBASIC4.13□□□□□ -1.75
FOXC1Q12948 RNU6-513P-201ENST00000516104 104 ntBASIC4.13□□□□□ -1.75
FOXC1Q12948 RNU6-162P-201ENST00000516228 103 ntBASIC4.13□□□□□ -1.75
FOXC1Q12948 RNU6-267P-201ENST00000516714 103 ntBASIC4.13□□□□□ -1.75
FOXC1Q12948 RNU6-928P-201ENST00000516876 104 ntBASIC4.13□□□□□ -1.75
FOXC1Q12948 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms