Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.72□□□□□ -2.13
CKAP4Q07065 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CKAP4Q07065 AC002543.1-201ENST00000299783 1954 ntBASIC1.72□□□□□ -2.13
CKAP4Q07065 RNU6-1188P-201ENST00000363795 107 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 Y_RNA.384-201ENST00000383909 102 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-842P-201ENST00000384269 107 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-43P-201ENST00000384302 107 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-784P-201ENST00000384330 106 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-1297P-201ENST00000384415 104 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 Y_RNA.535-201ENST00000384612 99 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 MIR544A-201ENST00000384855 91 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 MTCYBP4-201ENST00000401524 249 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AL133475.1-201ENST00000404414 305 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 Y_RNA.594-201ENST00000410373 140 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-1140P-201ENST00000410517 106 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-370P-201ENST00000411008 104 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-1245P-201ENST00000411130 106 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.71□□□□□ -2.14
CKAP4Q07065 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.71□□□□□ -2.14
CKAP4Q07065 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.71□□□□□ -2.14
CKAP4Q07065 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU7-152P-201ENST00000458982 64 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 SNORD19B-201ENST00000459623 84 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.71□□□□□ -2.14
CKAP4Q07065 RNU6-559P-201ENST00000516151 98 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 Y_RNA.670-201ENST00000516255 105 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 Y_RNA.708-201ENST00000516950 96 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.71□□□□□ -2.14
CKAP4Q07065 APOOP3-201ENST00000536787 586 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.71□□□□□ -2.14
CKAP4Q07065 AC110588.1-201ENST00000559699 137 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.71□□□□□ -2.14
CKAP4Q07065 MIR3126-201ENST00000577443 74 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 MIR3976-201ENST00000606807 139 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AC096772.1-201ENST00000609146 564 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AC005296.1-201ENST00000616145 209 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 AL359854.1-201ENST00000614203 1594 ntBASIC1.71□□□□□ -2.14
CKAP4Q07065 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.71□□□□□ -2.14
CKAP4Q07065 RNA5SP276-201ENST00000362580 94 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 Y_RNA.58-201ENST00000362807 102 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 Y_RNA.67-201ENST00000362870 100 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 SNORD50.1-201ENST00000362987 71 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 SNORD114-19-201ENST00000363072 75 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNU6-486P-201ENST00000363116 107 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 Y_RNA.154-201ENST00000363624 102 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNU6-1059P-201ENST00000363752 98 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNU6-1141P-201ENST00000364520 107 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNY3P1-201ENST00000365085 102 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNY3-201ENST00000365484 102 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 Y_RNA.490-201ENST00000384413 102 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNU6-933P-201ENST00000384424 107 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNU6-790P-201ENST00000384479 105 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 AL591034.2-201ENST00000402839 359 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNU6-1050P-201ENST00000410388 107 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RN7SKP61-201ENST00000410642 295 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 AF228730.4-201ENST00000421457 183 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 EIF4EP2-201ENST00000422816 654 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 MTND3P9-201ENST00000429526 346 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.7□□□□□ -2.14
CKAP4Q07065 AC012308.1-201ENST00000451232 178 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 AC079354.2-201ENST00000453523 154 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.7□□□□□ -2.14
CKAP4Q07065 RNA5SP182-201ENST00000516064 82 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 Y_RNA.675-201ENST00000516389 149 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 Y_RNA.718-201ENST00000517110 102 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.7□□□□□ -2.14
CKAP4Q07065 MIR5696-201ENST00000578474 85 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 SNORA43.4-201ENST00000629559 138 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 AP000560.1-201ENST00000624150 1937 ntBASIC1.7□□□□□ -2.14
CKAP4Q07065 Y_RNA.40-201ENST00000362645 93 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 RNU6-529P-201ENST00000363383 104 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 Y_RNA.404-201ENST00000383978 102 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CKAP4Q07065 RNY4P36-201ENST00000391116 96 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 SNORA26.3-201ENST00000391119 136 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 SNORA75.4-201ENST00000391278 119 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 BTF3L4P2-201ENST00000392798 346 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 HMGN2P39-201ENST00000398005 273 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 Z98742.3-201ENST00000418637 326 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.69□□□□□ -2.14
CKAP4Q07065 MTND4P28-201ENST00000426217 387 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC078809.1-201ENST00000427601 140 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 RPL39P29-201ENST00000447779 157 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 ELOCP24-201ENST00000456370 334 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 RPL30P12-201ENST00000474666 353 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 RPL36AP48-201ENST00000485521 314 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC091874.1-201ENST00000511402 339 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 SMURF2P1-201ENST00000514992 481 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 ACA59.1-201ENST00000515966 143 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.69□□□□□ -2.14
CKAP4Q07065 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.69□□□□□ -2.14
CKAP4Q07065 AC016256.1-201ENST00000547971 354 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.69□□□□□ -2.14
CKAP4Q07065 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.69□□□□□ -2.14
CKAP4Q07065 MIR5690-201ENST00000583739 73 ntBASIC1.69□□□□□ -2.14
CKAP4Q07065 BNIP3P22-201ENST00000593399 556 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms