Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AL589823.1-201ENST00000429577 183 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC244670.1-201ENST00000436879 112 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC245517.4-201ENST00000448601 281 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 snoU13.9-201ENST00000458927 103 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC079140.5-201ENST00000507882 310 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RNU6-189P-201ENST00000516120 101 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 SNORA31.16-201ENST00000516773 139 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 RN7SKP256-201ENST00000517201 314 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 HSPE1P4-201ENST00000550617 308 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AL161670.1-201ENST00000554348 137 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 MIR3941-201ENST00000582572 103 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC092747.3-201ENST00000603769 301 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC097065.2-201ENST00000608159 533 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC064836.2-201ENST00000609491 462 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC103705.1-201ENST00000619013 241 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 AC073534.2-201ENST00000620377 381 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TNFRSF9Q07011 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
TNFRSF9Q07011 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AL391987.6-201ENST00000305671 199 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU6-82P-201ENST00000363970 107 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU4-13P-201ENST00000364019 141 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU6-1141P-201ENST00000364520 107 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU6-203P-201ENST00000384038 104 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 MIR29B2-201ENST00000385055 81 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC004965.1-201ENST00000413033 213 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AL590135.1-201ENST00000422215 156 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC019205.3-201ENST00000424573 156 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 MTND1P1-201ENST00000445453 368 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC016700.2-201ENST00000446011 156 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU7-138P-201ENST00000459479 64 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC015911.1-201ENST00000495111 156 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC105313.1-201ENST00000509121 353 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 MIR449C-201ENST00000516047 92 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU6-1069P-201ENST00000516612 133 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU6-902P-201ENST00000517212 91 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 RNU6-323P-201ENST00000521915 107 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC115990.1-201ENST00000526957 301 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC022616.8-201ENST00000533569 253 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 MIR5692C1-201ENST00000585309 91 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 VN1R107P-201ENST00000601784 209 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AP001836.1-201ENST00000604675 523 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AL034555.1-201ENST00000604816 211 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC018889.1-201ENST00000605372 397 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AL050343.2-201ENST00000607338 280 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 AC092807.2-201ENST00000609367 243 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 SNORD98-201ENST00000636377 67 ntBASIC1.09□□□□□ -2.23
TNFRSF9Q07011 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
TNFRSF9Q07011 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 SNORA7.1-201ENST00000363750 139 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 SNORA36A-201ENST00000384221 132 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 RNU6-611P-201ENST00000384276 104 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AP000275.1-201ENST00000411943 390 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC078809.1-201ENST00000427601 140 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 TIMM9P3-201ENST00000428659 274 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 MTCO2P3-201ENST00000442543 421 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 MTCO2P7-201ENST00000446518 666 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 PRELID3BP1-201ENST00000457142 540 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC005908.1-201ENST00000468701 347 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC083904.1-201ENST00000487828 231 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC145146.1-201ENST00000496370 254 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC022447.4-201ENST00000504053 364 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 RNA5SP445-201ENST00000515889 115 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 RNU6-314P-201ENST00000516574 104 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AP005660.1-201ENST00000522972 293 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC104576.1-201ENST00000524225 88 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC018630.3-201ENST00000542637 96 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC025423.5-201ENST00000550230 219 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 TRAV32-201ENST00000553993 340 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC019288.1-201ENST00000557918 224 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC078795.3-201ENST00000602913 472 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms