Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AC012557.2-201ENST00000605919 418 ntBASIC1.67□□□□□ -2.14
CSTF1Q05048 AP001330.5-201ENST00000607176 411 ntBASIC1.67□□□□□ -2.14
CSTF1Q05048 AC084782.3-201ENST00000612282 578 ntBASIC1.67□□□□□ -2.14
CSTF1Q05048 AC090517.2-201ENST00000614966 680 ntBASIC1.67□□□□□ -2.14
CSTF1Q05048 AL590240.4-201ENST00000616908 390 ntBASIC1.67□□□□□ -2.14
CSTF1Q05048 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
CSTF1Q05048 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
CSTF1Q05048 Y_RNA.167-201ENST00000363735 109 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 Y_RNA.256-201ENST00000364594 104 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 RNU6-438P-201ENST00000365561 103 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 Y_RNA.399-201ENST00000383955 105 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 RNU6-26P-201ENST00000383985 107 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 RNU6-160P-201ENST00000384591 107 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 Y_RNA.619-201ENST00000410951 90 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 RNU6-1068P-201ENST00000410958 103 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.66□□□□□ -2.14
CSTF1Q05048 SNAP23P1-201ENST00000433229 246 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.66□□□□□ -2.14
CSTF1Q05048 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.66□□□□□ -2.14
CSTF1Q05048 SNRPEP8-201ENST00000442866 260 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 RNU6-261P-201ENST00000459506 102 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 AC016632.1-201ENST00000503994 196 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 AC011352.1-201ENST00000512300 793 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 Y_RNA.670-201ENST00000516255 105 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 RNU6-314P-201ENST00000516574 104 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
CSTF1Q05048 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.66□□□□□ -2.14
CSTF1Q05048 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.66□□□□□ -2.14
CSTF1Q05048 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 AL157834.3-201ENST00000615543 103 ntBASIC1.66□□□□□ -2.14
CSTF1Q05048 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CSTF1Q05048 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CSTF1Q05048 MTND4P5-201ENST00000435821 1374 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 Y_RNA.255-201ENST00000364581 97 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 SNORD32A-201ENST00000364805 84 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RNU4-66P-201ENST00000365199 138 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 SNORA69-201ENST00000383895 132 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RNU6-192P-201ENST00000391253 100 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RPS29P13-201ENST00000402041 169 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RNU6-908P-201ENST00000410160 94 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RNU6-648P-201ENST00000410190 107 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.65□□□□□ -2.15
CSTF1Q05048 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.65□□□□□ -2.15
CSTF1Q05048 ATP5EP1-201ENST00000510257 156 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 Y_RNA.693-201ENST00000516641 110 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RNA5SP102-201ENST00000516865 106 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 AC104576.1-201ENST00000524225 88 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.65□□□□□ -2.15
CSTF1Q05048 AC015720.1-201ENST00000565251 277 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.65□□□□□ -2.15
CSTF1Q05048 MIR4424-201ENST00000585257 86 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 AC010928.2-201ENST00000588017 287 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RMST_3.1-201ENST00000611651 109 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 AC005609.4-201ENST00000625071 447 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 AC068137.3-201ENST00000639191 341 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 AC073869.6-201ENST00000640656 341 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.65□□□□□ -2.15
CSTF1Q05048 RNU6-451P-201ENST00000362921 107 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 RNA5SP493-201ENST00000364115 91 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 SNORD32B-201ENST00000364460 84 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 RNU6-1042P-201ENST00000384204 107 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 MIR208B-201ENST00000401172 77 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 RNU6-1148P-201ENST00000410992 104 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 RPS20P15-201ENST00000412792 311 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.64□□□□□ -2.15
CSTF1Q05048 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.64□□□□□ -2.15
CSTF1Q05048 MTND1P34-201ENST00000438556 671 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.64□□□□□ -2.15
CSTF1Q05048 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.64□□□□□ -2.15
CSTF1Q05048 MTCO3P38-201ENST00000468910 766 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.64□□□□□ -2.15
CSTF1Q05048 AC069439.1-201ENST00000494739 167 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.64□□□□□ -2.15
CSTF1Q05048 RNU6-718P-201ENST00000516166 105 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 RNU5F-4P-201ENST00000516581 114 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.64□□□□□ -2.15
CSTF1Q05048 RNU6-323P-201ENST00000521915 107 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.64□□□□□ -2.15
CSTF1Q05048 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.64□□□□□ -2.15
CSTF1Q05048 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.64□□□□□ -2.15
CSTF1Q05048 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.64□□□□□ -2.15
CSTF1Q05048 MIR3941-201ENST00000582572 103 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AC080078.2-201ENST00000603766 501 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AC092747.3-201ENST00000603769 301 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AP001836.1-201ENST00000604675 523 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.64□□□□□ -2.15
CSTF1Q05048 AC009541.1-201ENST00000438279 2662 ntBASIC1.64□□□□□ -2.15
CSTF1Q05048 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CSTF1Q05048 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.64□□□□□ -2.15
CSTF1Q05048 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CSTF1Q05048 MTND5P35-201ENST00000557537 1720 ntBASIC1.63□□□□□ -2.15
CSTF1Q05048 AC092268.1-201ENST00000342691 405 ntBASIC1.63□□□□□ -2.15
CSTF1Q05048 U3.9-201ENST00000363823 204 ntBASIC1.63□□□□□ -2.15
CSTF1Q05048 SNORD114-6-201ENST00000364393 72 ntBASIC1.63□□□□□ -2.15
CSTF1Q05048 RNU6-378P-201ENST00000384324 107 ntBASIC1.63□□□□□ -2.15
CSTF1Q05048 SNORD115-47-201ENST00000391226 86 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms