Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MTCYBP10-201ENST00000424905 650 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 AL162725.1-201ENST00000435405 301 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 HMGN2P34-201ENST00000437647 269 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 SNRPGP12-201ENST00000449481 213 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 SNRPGP20-201ENST00000604477 205 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 AC092574.1-201ENST00000609771 420 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 AL391903.3-201ENST00000612158 163 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 AC091925.1-201ENST00000623204 462 ntBASIC-0.13□□□□□ -2.43
HIST1H1AQ02539 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 RNA5SP264-201ENST00000363115 107 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 RNU6-960P-201ENST00000364056 120 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 MIR300-201ENST00000401138 83 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 MIR1284-201ENST00000408337 120 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 RNU2-62P-201ENST00000410868 191 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 AL356583.2-201ENST00000426536 280 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 TIMM9P3-201ENST00000428659 274 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 USP9YP28-201ENST00000435142 589 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 AC244670.1-201ENST00000436879 112 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 AC104332.1-201ENST00000440471 797 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 AP002001.1-203ENST00000534002 267 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 AC109810.1-201ENST00000534066 224 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 AC097372.5-201ENST00000623665 376 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 MIR371B-201ENST00000638082 66 ntBASIC-0.14□□□□□ -2.43
HIST1H1AQ02539 RNU6-511P-201ENST00000363496 107 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 SNORA42.1-201ENST00000363515 137 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 snoZ40.1-201ENST00000364540 72 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 VPS26BP1-201ENST00000417155 755 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 RPL31P35-201ENST00000431058 377 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 RPL23AP30-201ENST00000432419 501 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 MTCO1P19-201ENST00000443487 500 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AC067940.1-201ENST00000458411 300 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 RNA5SP216-201ENST00000516111 123 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AC023827.1-201ENST00000569247 97 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 MIR8054-201ENST00000620877 86 ntBASIC-0.15□□□□□ -2.43
HIST1H1AQ02539 SNORA2.2-201ENST00000365473 135 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 SNORA12.1-201ENST00000390873 148 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 SNORA26.3-201ENST00000391119 136 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 MTCO2P7-201ENST00000446518 666 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 RNU6-917P-201ENST00000516294 104 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 AC022868.1-201ENST00000517767 391 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 MIR4778-201ENST00000577635 80 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 AC011712.1-201ENST00000588959 234 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 AL162424.1-201ENST00000602325 221 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 AC091805.2-201ENST00000603848 235 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 AC004832.4-201ENST00000608952 331 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 AC078880.5-201ENST00000617845 421 ntBASIC-0.16□□□□□ -2.44
HIST1H1AQ02539 RNU6-105P-201ENST00000363909 104 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AC007283.2-201ENST00000424739 197 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 snoU13.25-201ENST00000458945 104 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 OR9P1P-201ENST00000496431 281 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 MTND1P22-201ENST00000510572 951 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 MIR5190-201ENST00000581537 80 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AC073544.1-201ENST00000600110 1595 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AC022217.4-201ENST00000604389 163 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 AC008133.2-201ENST00000624540 351 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 U4.7-201ENST00000638126 106 ntBASIC-0.17□□□□□ -2.44
HIST1H1AQ02539 MIR330-201ENST00000362196 94 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 RNU6-545P-201ENST00000362681 104 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 SNORD114-9-201ENST00000364370 72 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 RNU6-43P-201ENST00000384302 107 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 RNA5SP63-201ENST00000391225 112 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AL358176.2-201ENST00000425769 204 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AC078809.1-201ENST00000427601 140 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AC243964.1-201ENST00000441814 261 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 LINC01399-202ENST00000458450 244 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AL049829.1-201ENST00000465411 156 ntBASIC-0.18□□□□□ -2.44
HIST1H1AQ02539 AC093534.1-201ENST00000504977 132 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms