Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC009994.1-201ENST00000606889 253 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AP000240.1-201ENST00000609910 452 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 AL353149.1-201ENST00000610667 244 ntBASIC0.65□□□□□ -2.31
HOXC5Q00444 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.65□□□□□ -2.31
HOXC5Q00444 BX322639.1-202ENST00000423987 2213 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HOXC5Q00444 RNU6-1123P-201ENST00000362347 106 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 RNU6-534P-201ENST00000364877 106 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 RNA5SP109-201ENST00000391010 116 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
HOXC5Q00444 RPS29P13-201ENST00000402041 169 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.64□□□□□ -2.31
HOXC5Q00444 POLR2J4-204ENST00000418424 324 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC013410.2-201ENST00000422627 201 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AL593851.1-201ENST00000426171 157 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC016717.1-201ENST00000448918 286 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.64□□□□□ -2.31
HOXC5Q00444 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.64□□□□□ -2.31
HOXC5Q00444 MTCO3P7-201ENST00000510008 774 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC067942.3-201ENST00000512025 362 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.64□□□□□ -2.31
HOXC5Q00444 MIR4661-201ENST00000582720 75 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC091805.2-201ENST00000603848 235 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC016727.2-201ENST00000603988 621 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC064872.1-201ENST00000604823 1072 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 Z99289.3-201ENST00000605586 594 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC005014.3-201ENST00000605985 190 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC002044.1-201ENST00000606707 158 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC021506.2-201ENST00000612354 169 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AL133173.2-201ENST00000614270 90 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 SNORA43.4-201ENST00000629559 138 ntBASIC0.64□□□□□ -2.31
HOXC5Q00444 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNY1P10-201ENST00000363268 113 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNU6-1214P-201ENST00000363650 109 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNU1-93P-201ENST00000364704 169 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNU6-74P-201ENST00000384235 107 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNU6-925P-201ENST00000384629 104 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNU6-910P-201ENST00000390844 107 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNU6-1093P-201ENST00000391194 107 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 MIR1283-1-201ENST00000408494 87 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 MTATP6P19-201ENST00000413797 659 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXC5Q00444 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXC5Q00444 AC011233.1-201ENST00000422812 283 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 AC010154.1-201ENST00000425857 269 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.63□□□□□ -2.31
HOXC5Q00444 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.63□□□□□ -2.31
HOXC5Q00444 RPS4XP11-201ENST00000446897 772 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXC5Q00444 MTND2P39-201ENST00000457230 764 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 snoU13.6-201ENST00000458785 104 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 Y_RNA.638-201ENST00000459374 113 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 SNORA31.2-201ENST00000516019 134 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 RNU6-567P-201ENST00000516746 107 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 ELOCP32-201ENST00000548625 324 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 TPRKBP2-201ENST00000565969 475 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXC5Q00444 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.63□□□□□ -2.31
HOXC5Q00444 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.63□□□□□ -2.31
HOXC5Q00444 AC006001.4-201ENST00000622243 395 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 MTND5P17-201ENST00000418405 1603 ntBASIC0.63□□□□□ -2.31
HOXC5Q00444 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HOXC5Q00444 snoU2-30.2-201ENST00000362805 70 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 RNU4-28P-201ENST00000364739 141 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 SNORA72.2-201ENST00000365028 127 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
HOXC5Q00444 RPL21P1-201ENST00000399532 476 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AC090960.1-201ENST00000421072 306 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 HMGN2P34-201ENST00000437647 269 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AC073614.1-201ENST00000438690 650 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 UBE2D3P4-201ENST00000441973 436 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AL606517.2-201ENST00000442855 241 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 HSFY5P-201ENST00000453726 309 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.62□□□□□ -2.31
HOXC5Q00444 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.62□□□□□ -2.31
HOXC5Q00444 AC048334.1-201ENST00000477975 159 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 FABP5P5-201ENST00000515537 406 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AP003072.2-201ENST00000527756 676 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.62□□□□□ -2.31
HOXC5Q00444 MIR548AB-201ENST00000584917 84 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 MIR4753-201ENST00000585119 83 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AC245884.10-201ENST00000597355 337 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AC004223.4-201ENST00000612426 332 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 AC009509.4-201ENST00000619202 509 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 OR4G1P-203ENST00000641984 1631 ntBASIC0.62□□□□□ -2.31
HOXC5Q00444 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HOXC5Q00444 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
HOXC5Q00444 RNU6-417P-201ENST00000384712 107 ntBASIC0.61□□□□□ -2.31
HOXC5Q00444 MIR520E-201ENST00000384867 87 ntBASIC0.61□□□□□ -2.31
HOXC5Q00444 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
HOXC5Q00444 MTND3P17-201ENST00000416968 344 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms