Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
RAE1P78406 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RAE1P78406 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
RAE1P78406 Y_RNA.144-201ENST00000363521 113 ntBASIC2.63□□□□□ -1.99
RAE1P78406 Y_RNA.149-201ENST00000363558 117 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RNU6-873P-201ENST00000363833 107 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RNU6-879P-201ENST00000364328 108 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RNU6-281P-201ENST00000384212 103 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RNU6-318P-201ENST00000384283 103 ntBASIC2.63□□□□□ -1.99
RAE1P78406 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.63□□□□□ -1.99
RAE1P78406 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
RAE1P78406 WARS2P1-201ENST00000429678 537 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC112220.1-201ENST00000434628 355 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RPL21P2-201ENST00000440049 481 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.63□□□□□ -1.99
RAE1P78406 RPEP5-201ENST00000441137 268 ntBASIC2.63□□□□□ -1.99
RAE1P78406 FCF1P4-201ENST00000448326 183 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC080013.2-201ENST00000460866 323 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC073901.1-201ENST00000462471 408 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RN7SL297P-201ENST00000483161 293 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC010469.2-201ENST00000496412 480 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.63□□□□□ -1.99
RAE1P78406 MTCO2P24-201ENST00000515611 426 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RN7SKP49-201ENST00000516675 260 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC093023.1-201ENST00000547375 507 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.63□□□□□ -1.99
RAE1P78406 RAC1P9-201ENST00000604990 392 ntBASIC2.63□□□□□ -1.99
RAE1P78406 AC080128.1-201ENST00000474389 1917 ntBASIC2.63□□□□□ -1.99
RAE1P78406 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RAE1P78406 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
RAE1P78406 ZNF204P-201ENST00000416749 2397 ntBASIC2.63□□□□□ -1.99
RAE1P78406 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
RAE1P78406 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.62□□□□□ -1.99
RAE1P78406 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.62□□□□□ -1.99
RAE1P78406 RNA5SP361-201ENST00000362686 118 ntBASIC2.62□□□□□ -1.99
RAE1P78406 Y_RNA.210-201ENST00000364161 110 ntBASIC2.62□□□□□ -1.99
RAE1P78406 DYNLT3P1-201ENST00000378574 347 ntBASIC2.62□□□□□ -1.99
RAE1P78406 Y_RNA.471-201ENST00000384312 102 ntBASIC2.62□□□□□ -1.99
RAE1P78406 MIR320B2-201ENST00000408479 138 ntBASIC2.62□□□□□ -1.99
RAE1P78406 RNU6-1001P-201ENST00000411265 100 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.62□□□□□ -1.99
RAE1P78406 AC104332.2-201ENST00000429959 156 ntBASIC2.62□□□□□ -1.99
RAE1P78406 MTCYBP9-201ENST00000431021 303 ntBASIC2.62□□□□□ -1.99
RAE1P78406 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.62□□□□□ -1.99
RAE1P78406 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.62□□□□□ -1.99
RAE1P78406 AC140059.1-201ENST00000489238 361 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC067942.3-201ENST00000512025 362 ntBASIC2.62□□□□□ -1.99
RAE1P78406 RNA5SP385-201ENST00000515947 110 ntBASIC2.62□□□□□ -1.99
RAE1P78406 RNU6-1012P-201ENST00000516606 109 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC022080.3-201ENST00000544433 482 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC008269.2-201ENST00000561915 1105 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC090517.1-201ENST00000569307 266 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC069294.1-201ENST00000608397 350 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.62□□□□□ -1.99
RAE1P78406 AC010205.1-201ENST00000616668 449 ntBASIC2.62□□□□□ -1.99
RAE1P78406 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RAE1P78406 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RAE1P78406 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.61□□□□□ -1.99
RAE1P78406 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.61□□□□□ -1.99
RAE1P78406 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAE1P78406 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RAE1P78406 Y_RNA.176-201ENST00000363815 109 ntBASIC2.61□□□□□ -1.99
RAE1P78406 Y_RNA.574-201ENST00000384766 95 ntBASIC2.61□□□□□ -1.99
RAE1P78406 RNA5SP344-201ENST00000411081 104 ntBASIC2.61□□□□□ -1.99
RAE1P78406 AL445305.1-201ENST00000432577 575 ntBASIC2.61□□□□□ -1.99
RAE1P78406 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.61□□□□□ -1.99
RAE1P78406 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
RAE1P78406 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.61□□□□□ -1.99
RAE1P78406 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
RAE1P78406 RNU6-635P-201ENST00000516651 102 ntBASIC2.61□□□□□ -1.99
RAE1P78406 RNU6-56P-201ENST00000516986 93 ntBASIC2.61□□□□□ -1.99
RAE1P78406 SNORA31.26-201ENST00000517250 137 ntBASIC2.61□□□□□ -1.99
RAE1P78406 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.61□□□□□ -1.99
RAE1P78406 AC079600.2-201ENST00000550076 130 ntBASIC2.61□□□□□ -1.99
RAE1P78406 AL713866.2-201ENST00000603579 219 ntBASIC2.61□□□□□ -1.99
RAE1P78406 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.61□□□□□ -1.99
RAE1P78406 SNRPGP20-201ENST00000604477 205 ntBASIC2.61□□□□□ -1.99
RAE1P78406 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
RAE1P78406 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RAE1P78406 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.61□□□□□ -1.99
RAE1P78406 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAE1P78406 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.6□□□□□ -1.99
RAE1P78406 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.6□□□□□ -1.99
RAE1P78406 RNU1-112P-201ENST00000364401 164 ntBASIC2.6□□□□□ -1.99
RAE1P78406 SNORD32B-201ENST00000364460 84 ntBASIC2.6□□□□□ -1.99
RAE1P78406 Y_RNA.458-201ENST00000384240 102 ntBASIC2.6□□□□□ -1.99
RAE1P78406 RNU6-611P-201ENST00000384276 104 ntBASIC2.6□□□□□ -1.99
RAE1P78406 MIR218-1-201ENST00000384999 110 ntBASIC2.6□□□□□ -1.99
RAE1P78406 MIR329-1-201ENST00000385028 80 ntBASIC2.6□□□□□ -1.99
RAE1P78406 RPL21P1-201ENST00000399532 476 ntBASIC2.6□□□□□ -1.99
RAE1P78406 Z96811.1-201ENST00000445880 108 ntBASIC2.6□□□□□ -1.99
RAE1P78406 AC023141.11-201ENST00000508864 202 ntBASIC2.6□□□□□ -1.99
RAE1P78406 Y_RNA.713-201ENST00000517013 96 ntBASIC2.6□□□□□ -1.99
RAE1P78406 COX6CP5-201ENST00000527162 228 ntBASIC2.6□□□□□ -1.99
RAE1P78406 AC023043.3-201ENST00000593113 385 ntBASIC2.6□□□□□ -1.99
RAE1P78406 AC005562.2-201ENST00000618264 111 ntBASIC2.6□□□□□ -1.99
RAE1P78406 AC090517.3-201ENST00000625170 141 ntBASIC2.6□□□□□ -1.99
RAE1P78406 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.6□□□□□ -1.99
RAE1P78406 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAE1P78406 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms