Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC132479.1-201ENST00000449160 144 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AC015911.1-201ENST00000495111 156 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.36□□□□□ -2.19
CCNA1P78396 LRRC34P2-201ENST00000514850 553 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.36□□□□□ -2.19
CCNA1P78396 AC103996.1-201ENST00000555468 102 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
CCNA1P78396 MTATP6P3-201ENST00000581686 676 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 FAM106DP-201ENST00000586416 501 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 RPL17P51-201ENST00000605218 238 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AC109347.2-201ENST00000610220 349 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 AL158063.1-201ENST00000615349 536 ntBASIC1.36□□□□□ -2.19
CCNA1P78396 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.36□□□□□ -2.19
CCNA1P78396 AC100821.1-201ENST00000523153 2479 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 Y_RNA.159-201ENST00000363674 87 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 SNORD114-27-201ENST00000363766 70 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 RNU6-827P-201ENST00000365553 106 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MTCYBP8-201ENST00000422855 651 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.35□□□□□ -2.19
CCNA1P78396 AC078809.1-201ENST00000427601 140 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MTND1P26-201ENST00000440488 538 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AC069257.2-201ENST00000441819 155 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AC013470.1-201ENST00000453438 462 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 SNRPFP3-201ENST00000457792 225 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.35□□□□□ -2.19
CCNA1P78396 AC098862.1-201ENST00000504991 413 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AK3P2-201ENST00000507976 429 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.35□□□□□ -2.19
CCNA1P78396 MTCO2P4-201ENST00000517968 247 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.35□□□□□ -2.19
CCNA1P78396 AC007834.2-201ENST00000536310 343 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.35□□□□□ -2.19
CCNA1P78396 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MIR4528-201ENST00000577763 90 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MIR3923-201ENST00000579521 83 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MIR3937-201ENST00000580135 106 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 VN1R107P-201ENST00000601784 209 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AP001596.2-201ENST00000608410 312 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 AC068205.3-201ENST00000636385 468 ntBASIC1.35□□□□□ -2.19
CCNA1P78396 MTND4P14-201ENST00000435799 1354 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 RNY1-201ENST00000364228 113 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 SNORA32.2-201ENST00000384049 122 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 MIR520E-201ENST00000384867 87 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 RNU6-903P-201ENST00000391270 109 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 RNU2-29P-201ENST00000410423 189 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.34□□□□□ -2.19
CCNA1P78396 SNAP23P1-201ENST00000433229 246 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 AL135790.2-201ENST00000437701 267 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.34□□□□□ -2.19
CCNA1P78396 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.34□□□□□ -2.19
CCNA1P78396 RNU7-63P-201ENST00000459054 62 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 GMFBP1-201ENST00000467831 427 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 ARL2BPP4-201ENST00000506854 471 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 AC079140.5-201ENST00000507882 310 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.34□□□□□ -2.19
CCNA1P78396 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.34□□□□□ -2.19
CCNA1P78396 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.34□□□□□ -2.19
CCNA1P78396 HSPE1P4-201ENST00000550617 308 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 HIF1AP1-201ENST00000553642 175 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.34□□□□□ -2.19
CCNA1P78396 AC109446.1-201ENST00000566172 220 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 AC008088.1-201ENST00000580993 280 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 AC012507.3-201ENST00000603556 477 ntBASIC1.34□□□□□ -2.19
CCNA1P78396 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CCNA1P78396 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.34□□□□□ -2.19
CCNA1P78396 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
CCNA1P78396 AC010615.1-201ENST00000594254 1764 ntBASIC1.34□□□□□ -2.2
CCNA1P78396 AP000568.1-201ENST00000282964 442 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 RNU6-1120P-201ENST00000362988 108 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 SNORD32A-201ENST00000364805 84 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 Y_RNA.381-201ENST00000365666 102 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.33□□□□□ -2.2
CCNA1P78396 MTCO1P21-201ENST00000416634 589 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 SNRPEP8-201ENST00000442866 260 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 ATP5J2P3-201ENST00000451550 258 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 AL356010.1-201ENST00000456364 102 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 RNU6-956P-201ENST00000458868 103 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.33□□□□□ -2.2
CCNA1P78396 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 AC091874.1-201ENST00000511402 339 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 OSBPL9P5-201ENST00000542581 171 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 MTCO3P23-201ENST00000561363 289 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.33□□□□□ -2.2
CCNA1P78396 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
CCNA1P78396 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCNA1P78396 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCNA1P78396 AC092268.1-201ENST00000342691 405 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 U3.9-201ENST00000363823 204 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 RNU6-1019P-201ENST00000364424 107 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 SNORA75-201ENST00000384158 137 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 RNU6-517P-201ENST00000384362 110 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 RPS29P13-201ENST00000402041 169 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 RPL37P10-201ENST00000412884 288 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.32□□□□□ -2.2
CCNA1P78396 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.32□□□□□ -2.2
CCNA1P78396 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms