Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.12□□□□□ -2.43
RPS28P62857 AL162424.1-201ENST00000602325 221 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 MTATP6P2-201ENST00000603319 678 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 SNRPGP20-201ENST00000604477 205 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 BCRP9-201ENST00000605312 388 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 RNU6-88P-201ENST00000606801 100 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AC009994.1-201ENST00000606889 253 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AC104458.1-201ENST00000608243 463 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AC004832.4-201ENST00000608952 331 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 AL096861.1-201ENST00000610899 123 ntBASIC-0.12□□□□□ -2.43
RPS28P62857 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.13□□□□□ -2.43
RPS28P62857 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.13□□□□□ -2.43
RPS28P62857 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.13□□□□□ -2.43
RPS28P62857 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
RPS28P62857 AC073343.1-201ENST00000328239 651 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 U3.4-201ENST00000363352 213 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
RPS28P62857 SNORA12.1-201ENST00000390873 148 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 CALM2P3-201ENST00000400429 449 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 USP9YP21-201ENST00000420603 432 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 AL445305.1-201ENST00000432577 575 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 MTCO1P19-201ENST00000443487 500 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC-0.13□□□□□ -2.43
RPS28P62857 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.13□□□□□ -2.43
RPS28P62857 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.13□□□□□ -2.43
RPS28P62857 CYCTP-201ENST00000504253 315 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 AC093534.1-201ENST00000504977 132 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC-0.13□□□□□ -2.43
RPS28P62857 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.13□□□□□ -2.43
RPS28P62857 AC068587.4-201ENST00000533893 186 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 FAM106DP-201ENST00000586416 501 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 AC004223.2-201ENST00000590309 544 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 Z99289.3-201ENST00000605586 594 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 RNU6-94P-201ENST00000607728 107 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.13□□□□□ -2.43
RPS28P62857 MIR6513-201ENST00000621188 64 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 MIR6852-201ENST00000621699 66 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 AC008133.2-201ENST00000624540 351 ntBASIC-0.13□□□□□ -2.43
RPS28P62857 RNU6-562P-201ENST00000362731 107 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 RNU6-560P-201ENST00000364007 108 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 RNY4P16-201ENST00000364768 94 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 EEF1A1P40-201ENST00000412883 573 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPS28P62857 AL591806.2-201ENST00000433122 173 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 AC074290.1-201ENST00000448883 135 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPS28P62857 AC108210.2-201ENST00000503681 201 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPS28P62857 FABP5P5-201ENST00000515537 406 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 MTND3P13-201ENST00000574391 343 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.14□□□□□ -2.43
RPS28P62857 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 MIR6767-201ENST00000637302 66 ntBASIC-0.14□□□□□ -2.43
RPS28P62857 RNU6-975P-201ENST00000384296 105 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.15□□□□□ -2.43
RPS28P62857 STAG3L5P-204ENST00000443759 179 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 TPT1P7-201ENST00000458300 517 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 AC079395.1-201ENST00000510981 262 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 AP003327.1-201ENST00000529684 127 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 AC087894.1-201ENST00000538359 518 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
RPS28P62857 AC022523.2-201ENST00000561045 150 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 MIR5000-201ENST00000577717 103 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 AC007014.2-201ENST00000615581 479 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.15□□□□□ -2.43
RPS28P62857 SEPT14P17-201ENST00000617978 177 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 AC092634.7-201ENST00000621022 103 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 MIR4315-1-201ENST00000636800 73 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 MIR4315-2-201ENST00000640925 73 ntBASIC-0.15□□□□□ -2.43
RPS28P62857 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.16□□□□□ -2.43
RPS28P62857 SNORD32A-201ENST00000364805 84 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 AC073261.1-201ENST00000429409 121 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 MTND1P20-201ENST00000430341 950 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 MTND1P32-201ENST00000433043 938 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 AC005002.2-201ENST00000438228 269 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.16□□□□□ -2.44
RPS28P62857 MTND3P25-201ENST00000509243 135 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 LRRC6P1-201ENST00000532188 885 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
RPS28P62857 MTND4LP25-201ENST00000570218 163 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 MIR4711-201ENST00000578274 70 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 SNORA4-201ENST00000584302 138 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 AP002360.4-201ENST00000606980 481 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 AC064807.4-201ENST00000607201 407 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.16□□□□□ -2.44
RPS28P62857 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.16□□□□□ -2.44
RPS28P62857 AL136221.1-201ENST00000621449 509 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 AC099786.3-201ENST00000565735 1410 ntBASIC-0.16□□□□□ -2.44
RPS28P62857 SNORD114-9-201ENST00000364370 72 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 RNU6-336P-201ENST00000364891 107 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 SNORD71-201ENST00000411292 86 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 RNU6-57P-201ENST00000411348 103 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPS28P62857 AL133396.1-201ENST00000432048 687 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPS28P62857 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.17□□□□□ -2.44
RPS28P62857 AC010486.2-201ENST00000505572 483 ntBASIC-0.17□□□□□ -2.44
RPS28P62857 MTND1P22-201ENST00000510572 951 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms