Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
LSM6P62312 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
LSM6P62312 Y_RNA.324-201ENST00000365165 102 ntBASIC0.33□□□□□ -2.36
LSM6P62312 RNU6-641P-201ENST00000384006 107 ntBASIC0.33□□□□□ -2.36
LSM6P62312 SNORA16.2-201ENST00000390991 127 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AL034345.1-201ENST00000407768 123 ntBASIC0.33□□□□□ -2.36
LSM6P62312 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.33□□□□□ -2.36
LSM6P62312 MIR1253-201ENST00000408273 105 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AC092423.1-201ENST00000430165 186 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AC098934.3-201ENST00000430450 190 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AL035398.1-201ENST00000430869 322 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.33□□□□□ -2.36
LSM6P62312 AC119618.1-201ENST00000434191 222 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AC074290.1-201ENST00000448883 135 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AC022364.2-201ENST00000457963 554 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AC016550.1-201ENST00000505348 785 ntBASIC0.33□□□□□ -2.36
LSM6P62312 RBBP4P6-201ENST00000508098 202 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AC104136.1-201ENST00000512969 394 ntBASIC0.33□□□□□ -2.36
LSM6P62312 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
LSM6P62312 RNU6-685P-201ENST00000517088 95 ntBASIC0.33□□□□□ -2.36
LSM6P62312 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
LSM6P62312 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
LSM6P62312 AC023050.3-201ENST00000541142 333 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AL391840.1-201ENST00000571144 367 ntBASIC0.33□□□□□ -2.36
LSM6P62312 AL360219.1-201ENST00000610230 366 ntBASIC0.33□□□□□ -2.36
LSM6P62312 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.33□□□□□ -2.36
LSM6P62312 AC023934.1-201ENST00000574529 2389 ntBASIC0.33□□□□□ -2.36
LSM6P62312 RNU6-37P-201ENST00000362692 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-11P-201ENST00000364234 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU1-133P-201ENST00000364867 167 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-25P-201ENST00000383873 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-1-201ENST00000383898 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-48P-201ENST00000384161 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-36P-201ENST00000384172 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-4P-201ENST00000384205 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-5P-201ENST00000384238 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-3P-201ENST00000384314 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-16P-201ENST00000384385 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-15P-201ENST00000384534 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-2-201ENST00000384627 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-29P-201ENST00000384637 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-9-201ENST00000384776 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-33P-201ENST00000384793 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 MIR558-201ENST00000384920 94 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RPS29P13-201ENST00000402041 169 ntBASIC0.32□□□□□ -2.36
LSM6P62312 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.32□□□□□ -2.36
LSM6P62312 CDK8P2-201ENST00000415020 547 ntBASIC0.32□□□□□ -2.36
LSM6P62312 HSFY7P-201ENST00000432672 318 ntBASIC0.32□□□□□ -2.36
LSM6P62312 HSFY8P-201ENST00000437934 318 ntBASIC0.32□□□□□ -2.36
LSM6P62312 AL133217.1-201ENST00000450980 425 ntBASIC0.32□□□□□ -2.36
LSM6P62312 AC013470.1-201ENST00000453438 462 ntBASIC0.32□□□□□ -2.36
LSM6P62312 SNRPGP9-201ENST00000456025 225 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RPS26P48-201ENST00000491713 339 ntBASIC0.32□□□□□ -2.36
LSM6P62312 SNORA70.12-201ENST00000516084 153 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-947P-201ENST00000516264 106 ntBASIC0.32□□□□□ -2.36
LSM6P62312 AC016256.1-201ENST00000547971 354 ntBASIC0.32□□□□□ -2.36
LSM6P62312 AL162424.1-201ENST00000602325 221 ntBASIC0.32□□□□□ -2.36
LSM6P62312 RNU6-6P-201ENST00000606623 107 ntBASIC0.32□□□□□ -2.36
LSM6P62312 AC008250.2-201ENST00000615261 205 ntBASIC0.32□□□□□ -2.36
LSM6P62312 MIR6516-201ENST00000630554 81 ntBASIC0.32□□□□□ -2.36
LSM6P62312 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
LSM6P62312 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.32□□□□□ -2.36
LSM6P62312 AC027514.1-201ENST00000588561 1603 ntBASIC0.31□□□□□ -2.36
LSM6P62312 SNORA33-201ENST00000363664 130 ntBASIC0.31□□□□□ -2.36
LSM6P62312 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
LSM6P62312 Y_RNA.224-201ENST00000364308 111 ntBASIC0.31□□□□□ -2.36
LSM6P62312 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
LSM6P62312 MIR653-201ENST00000385279 96 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AL451046.2-201ENST00000403074 277 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC090960.1-201ENST00000421072 306 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC010154.1-201ENST00000425857 269 ntBASIC0.31□□□□□ -2.36
LSM6P62312 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.31□□□□□ -2.36
LSM6P62312 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.31□□□□□ -2.36
LSM6P62312 AC233266.1-201ENST00000454518 96 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC008628.2-201ENST00000502605 298 ntBASIC0.31□□□□□ -2.36
LSM6P62312 RNU1-142P-201ENST00000516682 145 ntBASIC0.31□□□□□ -2.36
LSM6P62312 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.31□□□□□ -2.36
LSM6P62312 AC090049.2-201ENST00000550377 109 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.31□□□□□ -2.36
LSM6P62312 AC146944.4-201ENST00000602697 718 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC097478.2-201ENST00000610572 514 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC242852.1-201ENST00000612151 96 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC073349.3-201ENST00000617616 186 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC244015.1-201ENST00000622301 99 ntBASIC0.31□□□□□ -2.36
LSM6P62312 AC106754.2-201ENST00000623006 233 ntBASIC0.31□□□□□ -2.36
LSM6P62312 RNU6-61P-201ENST00000365528 109 ntBASIC0.3□□□□□ -2.36
LSM6P62312 SNORD116-13-201ENST00000384408 92 ntBASIC0.3□□□□□ -2.36
LSM6P62312 RNU6-45P-201ENST00000384471 107 ntBASIC0.3□□□□□ -2.36
LSM6P62312 RNU6-417P-201ENST00000384712 107 ntBASIC0.3□□□□□ -2.36
LSM6P62312 RNA5SP247-201ENST00000411181 105 ntBASIC0.3□□□□□ -2.36
LSM6P62312 SNAP23P1-201ENST00000433229 246 ntBASIC0.3□□□□□ -2.36
LSM6P62312 AC112204.1-201ENST00000502591 103 ntBASIC0.3□□□□□ -2.36
LSM6P62312 AC116347.2-201ENST00000514912 523 ntBASIC0.3□□□□□ -2.36
LSM6P62312 RNU6-496P-201ENST00000516145 99 ntBASIC0.3□□□□□ -2.36
LSM6P62312 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.3□□□□□ -2.36
LSM6P62312 AL390123.1-201ENST00000603216 237 ntBASIC0.3□□□□□ -2.36
LSM6P62312 Z99289.3-201ENST00000605586 594 ntBASIC0.3□□□□□ -2.36
LSM6P62312 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
LSM6P62312 AC243829.3-201ENST00000622177 108 ntBASIC0.3□□□□□ -2.36
LSM6P62312 AC019226.2-201ENST00000625973 424 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms