Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.01□□□□□ -2.41
LSM3P62310 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.01□□□□□ -2.41
LSM3P62310 SNRPGP20-201ENST00000604477 205 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 AL356157.2-201ENST00000605122 111 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 Z99289.3-201ENST00000605586 594 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-6P-201ENST00000606623 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 AP002360.4-201ENST00000606980 481 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.01□□□□□ -2.41
LSM3P62310 AC068880.4-201ENST00000623082 495 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.01□□□□□ -2.41
LSM3P62310 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
LSM3P62310 RNA5SP264-201ENST00000363115 107 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 RNU6-342P-201ENST00000384521 104 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 CDK8P2-201ENST00000415020 547 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC-0.02□□□□□ -2.41
LSM3P62310 RPL31P35-201ENST00000431058 377 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 AC093850.1-201ENST00000454121 251 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 FABP5P5-201ENST00000515537 406 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 RNA5SP458-201ENST00000516188 119 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 RNU2-34P-201ENST00000516534 121 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 AC109479.2-201ENST00000517842 174 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 MTND4LP26-201ENST00000518144 282 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 AP000889.1-201ENST00000530968 660 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
LSM3P62310 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.02□□□□□ -2.41
LSM3P62310 AC234772.3-201ENST00000602277 528 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 AC100812.1-201ENST00000607622 580 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.02□□□□□ -2.41
LSM3P62310 AC072039.2-201ENST00000608883 439 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 AL138726.1-201ENST00000614873 333 ntBASIC-0.02□□□□□ -2.41
LSM3P62310 RNU6-723P-201ENST00000383973 107 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 RNU6-298P-201ENST00000390888 96 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 AC016909.1-201ENST00000415916 166 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.03□□□□□ -2.41
LSM3P62310 OR9P1P-201ENST00000496431 281 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 RNU6-377P-201ENST00000515965 102 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 LRRC6P1-201ENST00000532188 885 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 MIR4711-201ENST00000578274 70 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 MIR3192-201ENST00000584920 77 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 MIR4753-201ENST00000585119 83 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 AC144521.1-201ENST00000607148 956 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 MIR6513-201ENST00000621188 64 ntBASIC-0.03□□□□□ -2.41
LSM3P62310 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
LSM3P62310 U3.4-201ENST00000363352 213 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 RNA5SP62-201ENST00000363457 110 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 SNORD114-22-201ENST00000365423 72 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 RNA5SP219-201ENST00000390940 113 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 MIR548J-201ENST00000408833 112 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 MTND1P32-201ENST00000433043 938 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 MTND4P15-201ENST00000437913 1033 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.04□□□□□ -2.42
LSM3P62310 SNRPGP12-201ENST00000449481 213 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 MTCO2P18-201ENST00000457151 658 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.04□□□□□ -2.42
LSM3P62310 RNA5SP216-201ENST00000516111 123 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.04□□□□□ -2.42
LSM3P62310 MIR5000-201ENST00000577717 103 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 AC146944.4-201ENST00000602697 718 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 AL357312.1-201ENST00000603879 298 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 AC024060.1-201ENST00000607052 494 ntBASIC-0.04□□□□□ -2.42
LSM3P62310 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 SNORA24.1-201ENST00000384401 135 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 RNU6-177P-201ENST00000411257 104 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 AC078809.1-201ENST00000427601 140 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 ISCA1P6-201ENST00000427740 390 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 AC022364.2-201ENST00000457963 554 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 RNU7-51P-201ENST00000516560 62 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 AC106038.2-201ENST00000520706 568 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.05□□□□□ -2.42
LSM3P62310 AC009712.1-201ENST00000564938 316 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 MIR5697-201ENST00000578045 78 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 AL139286.2-201ENST00000606838 396 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 AC004832.4-201ENST00000608952 331 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 AL512427.1-201ENST00000618593 349 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 AC006386.1-201ENST00000619436 415 ntBASIC-0.05□□□□□ -2.42
LSM3P62310 RNU6-975P-201ENST00000384296 105 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 RNU6-39P-201ENST00000384344 107 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 MIR300-201ENST00000401138 83 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 MRPL42P3-201ENST00000401492 326 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 MIR1253-201ENST00000408273 105 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 RNA5SP193-201ENST00000410353 107 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 RNU6-607P-201ENST00000411283 108 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.06□□□□□ -2.42
LSM3P62310 MTCYBP10-201ENST00000424905 650 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 CALM2P4-201ENST00000430810 426 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.06□□□□□ -2.42
LSM3P62310 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.06□□□□□ -2.42
LSM3P62310 STAG3L5P-204ENST00000443759 179 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.06□□□□□ -2.42
LSM3P62310 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.06□□□□□ -2.42
LSM3P62310 RPS20P10-201ENST00000451209 253 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.06□□□□□ -2.42
LSM3P62310 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 RNU6-948P-201ENST00000516374 107 ntBASIC-0.06□□□□□ -2.42
LSM3P62310 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms