Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU4-42P-201ENST00000364738 142 ntBASIC1.72□□□□□ -2.13
SRP54P61011 RNU6-1026P-201ENST00000384465 108 ntBASIC1.72□□□□□ -2.13
SRP54P61011 Y_RNA.559-201ENST00000384686 107 ntBASIC1.72□□□□□ -2.13
SRP54P61011 RNU6-1093P-201ENST00000391194 107 ntBASIC1.72□□□□□ -2.13
SRP54P61011 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SRP54P61011 NCOR1P3-201ENST00000420479 303 ntBASIC1.72□□□□□ -2.13
SRP54P61011 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.72□□□□□ -2.13
SRP54P61011 MRPS10P2-201ENST00000431226 381 ntBASIC1.72□□□□□ -2.13
SRP54P61011 MTND1P1-201ENST00000445453 368 ntBASIC1.72□□□□□ -2.13
SRP54P61011 AC112492.4-201ENST00000456549 352 ntBASIC1.72□□□□□ -2.13
SRP54P61011 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
SRP54P61011 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.72□□□□□ -2.13
SRP54P61011 AC019235.1-201ENST00000503847 207 ntBASIC1.72□□□□□ -2.13
SRP54P61011 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.72□□□□□ -2.13
SRP54P61011 SNORA44.1-201ENST00000517031 108 ntBASIC1.72□□□□□ -2.13
SRP54P61011 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.72□□□□□ -2.13
SRP54P61011 HSBP1P1-201ENST00000555205 166 ntBASIC1.72□□□□□ -2.13
SRP54P61011 SUB1P4-201ENST00000566062 339 ntBASIC1.72□□□□□ -2.13
SRP54P61011 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.72□□□□□ -2.13
SRP54P61011 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
SRP54P61011 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.72□□□□□ -2.13
SRP54P61011 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.72□□□□□ -2.13
SRP54P61011 AC022513.1-201ENST00000624512 117 ntBASIC1.72□□□□□ -2.13
SRP54P61011 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.72□□□□□ -2.13
SRP54P61011 OR4G1P-203ENST00000641984 1631 ntBASIC1.72□□□□□ -2.13
SRP54P61011 MTND5P9-201ENST00000503854 1755 ntBASIC1.72□□□□□ -2.13
SRP54P61011 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SRP54P61011 RNU6-562P-201ENST00000362731 107 ntBASIC1.71□□□□□ -2.14
SRP54P61011 RNU6-1286P-201ENST00000383871 107 ntBASIC1.71□□□□□ -2.14
SRP54P61011 SNORA29-201ENST00000384183 140 ntBASIC1.71□□□□□ -2.14
SRP54P61011 SNORA12.2-201ENST00000391040 156 ntBASIC1.71□□□□□ -2.14
SRP54P61011 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SRP54P61011 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.71□□□□□ -2.14
SRP54P61011 MTCO1P20-201ENST00000425366 358 ntBASIC1.71□□□□□ -2.14
SRP54P61011 MTCO3P46-201ENST00000425787 232 ntBASIC1.71□□□□□ -2.14
SRP54P61011 ERLEC1P1-201ENST00000433806 578 ntBASIC1.71□□□□□ -2.14
SRP54P61011 MTND2P22-201ENST00000444325 1033 ntBASIC1.71□□□□□ -2.14
SRP54P61011 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SRP54P61011 AC007395.1-201ENST00000451333 677 ntBASIC1.71□□□□□ -2.14
SRP54P61011 MTCO1P29-201ENST00000496868 288 ntBASIC1.71□□□□□ -2.14
SRP54P61011 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.71□□□□□ -2.14
SRP54P61011 AC092436.3-201ENST00000511788 257 ntBASIC1.71□□□□□ -2.14
SRP54P61011 HMGB1P33-201ENST00000563485 527 ntBASIC1.71□□□□□ -2.14
SRP54P61011 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.71□□□□□ -2.14
SRP54P61011 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
SRP54P61011 AL162413.1-201ENST00000603198 110 ntBASIC1.71□□□□□ -2.14
SRP54P61011 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
SRP54P61011 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.71□□□□□ -2.14
SRP54P61011 RNU6-89P-201ENST00000606519 100 ntBASIC1.71□□□□□ -2.14
SRP54P61011 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.71□□□□□ -2.14
SRP54P61011 FAM157A-202ENST00000615155 405 ntBASIC1.71□□□□□ -2.14
SRP54P61011 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.71□□□□□ -2.14
SRP54P61011 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.71□□□□□ -2.14
SRP54P61011 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
SRP54P61011 RNU5B-2P-201ENST00000363036 113 ntBASIC1.7□□□□□ -2.14
SRP54P61011 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
SRP54P61011 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SRP54P61011 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SRP54P61011 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SRP54P61011 RNU6-1068P-201ENST00000410958 103 ntBASIC1.7□□□□□ -2.14
SRP54P61011 SNRPEP10-201ENST00000420249 274 ntBASIC1.7□□□□□ -2.14
SRP54P61011 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.7□□□□□ -2.14
SRP54P61011 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.7□□□□□ -2.14
SRP54P61011 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.7□□□□□ -2.14
SRP54P61011 HSPE1P21-201ENST00000438283 308 ntBASIC1.7□□□□□ -2.14
SRP54P61011 AC008834.1-201ENST00000511612 175 ntBASIC1.7□□□□□ -2.14
SRP54P61011 RNU6-1281P-201ENST00000516223 105 ntBASIC1.7□□□□□ -2.14
SRP54P61011 SUMO2P18-201ENST00000518873 252 ntBASIC1.7□□□□□ -2.14
SRP54P61011 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.7□□□□□ -2.14
SRP54P61011 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.7□□□□□ -2.14
SRP54P61011 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.7□□□□□ -2.14
SRP54P61011 AC026470.2-201ENST00000561492 181 ntBASIC1.7□□□□□ -2.14
SRP54P61011 FGF7P1-201ENST00000582820 288 ntBASIC1.7□□□□□ -2.14
SRP54P61011 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.7□□□□□ -2.14
SRP54P61011 AP000942.3-201ENST00000603702 160 ntBASIC1.7□□□□□ -2.14
SRP54P61011 AL359697.1-201ENST00000624879 587 ntBASIC1.7□□□□□ -2.14
SRP54P61011 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.69□□□□□ -2.14
SRP54P61011 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SRP54P61011 RNU6-661P-201ENST00000362409 107 ntBASIC1.69□□□□□ -2.14
SRP54P61011 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SRP54P61011 SNORA18.2-201ENST00000383865 132 ntBASIC1.69□□□□□ -2.14
SRP54P61011 RNU6-128P-201ENST00000383976 107 ntBASIC1.69□□□□□ -2.14
SRP54P61011 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
SRP54P61011 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.69□□□□□ -2.14
SRP54P61011 RNU6-325P-201ENST00000411132 105 ntBASIC1.69□□□□□ -2.14
SRP54P61011 VN1R36P-201ENST00000414936 291 ntBASIC1.69□□□□□ -2.14
SRP54P61011 AL358453.1-201ENST00000422522 250 ntBASIC1.69□□□□□ -2.14
SRP54P61011 USP9YP28-201ENST00000435142 589 ntBASIC1.69□□□□□ -2.14
SRP54P61011 MTCO1P44-201ENST00000441935 243 ntBASIC1.69□□□□□ -2.14
SRP54P61011 AMD1P1-201ENST00000457220 922 ntBASIC1.69□□□□□ -2.14
SRP54P61011 snoU13.6-201ENST00000458785 104 ntBASIC1.69□□□□□ -2.14
SRP54P61011 AC097473.1-201ENST00000508142 408 ntBASIC1.69□□□□□ -2.14
SRP54P61011 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.69□□□□□ -2.14
SRP54P61011 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SRP54P61011 CPDP1-201ENST00000579660 283 ntBASIC1.69□□□□□ -2.14
SRP54P61011 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.69□□□□□ -2.14
SRP54P61011 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.69□□□□□ -2.14
SRP54P61011 MIR8076-201ENST00000611401 83 ntBASIC1.69□□□□□ -2.14
SRP54P61011 DISC2.1-201ENST00000612827 205 ntBASIC1.69□□□□□ -2.14
SRP54P61011 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms