Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.42□□□□□ -2.34
CDC42P60953 AC009541.1-201ENST00000438279 2662 ntBASIC0.42□□□□□ -2.34
CDC42P60953 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CDC42P60953 RNU6-179P-201ENST00000363350 107 ntBASIC0.41□□□□□ -2.34
CDC42P60953 SNORA33-201ENST00000363664 130 ntBASIC0.41□□□□□ -2.34
CDC42P60953 Y_RNA.363-201ENST00000365529 113 ntBASIC0.41□□□□□ -2.34
CDC42P60953 RNA5SP109-201ENST00000391010 116 ntBASIC0.41□□□□□ -2.34
CDC42P60953 MIR1283-1-201ENST00000408494 87 ntBASIC0.41□□□□□ -2.34
CDC42P60953 MIR548J-201ENST00000408833 112 ntBASIC0.41□□□□□ -2.34
CDC42P60953 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.41□□□□□ -2.34
CDC42P60953 AC007283.2-201ENST00000424739 197 ntBASIC0.41□□□□□ -2.34
CDC42P60953 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.41□□□□□ -2.34
CDC42P60953 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.41□□□□□ -2.34
CDC42P60953 AC105758.1-201ENST00000506038 399 ntBASIC0.41□□□□□ -2.34
CDC42P60953 APOOP3-201ENST00000536787 586 ntBASIC0.41□□□□□ -2.34
CDC42P60953 AL031281.1-201ENST00000604049 488 ntBASIC0.41□□□□□ -2.34
CDC42P60953 SNORD3E-202ENST00000627253 216 ntBASIC0.41□□□□□ -2.34
CDC42P60953 RNU4-12P-201ENST00000365233 139 ntBASIC0.4□□□□□ -2.35
CDC42P60953 RNU6-969P-201ENST00000383900 105 ntBASIC0.4□□□□□ -2.35
CDC42P60953 MIR499A-201ENST00000384903 122 ntBASIC0.4□□□□□ -2.35
CDC42P60953 MIR208B-201ENST00000401172 77 ntBASIC0.4□□□□□ -2.35
CDC42P60953 MRPL42P2-201ENST00000403169 426 ntBASIC0.4□□□□□ -2.35
CDC42P60953 ELOCP4-201ENST00000420090 333 ntBASIC0.4□□□□□ -2.35
CDC42P60953 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.4□□□□□ -2.35
CDC42P60953 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
CDC42P60953 SRRM1P2-201ENST00000464531 1192 ntBASIC0.4□□□□□ -2.35
CDC42P60953 AC008628.2-201ENST00000502605 298 ntBASIC0.4□□□□□ -2.35
CDC42P60953 RNU6-922P-201ENST00000516753 99 ntBASIC0.4□□□□□ -2.35
CDC42P60953 MIR5000-201ENST00000577717 103 ntBASIC0.4□□□□□ -2.35
CDC42P60953 MIR4753-201ENST00000585119 83 ntBASIC0.4□□□□□ -2.35
CDC42P60953 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.4□□□□□ -2.35
CDC42P60953 AL359999.1-201ENST00000604513 294 ntBASIC0.4□□□□□ -2.35
CDC42P60953 AL353765.1-201ENST00000605514 183 ntBASIC0.4□□□□□ -2.35
CDC42P60953 Z99289.3-201ENST00000605586 594 ntBASIC0.4□□□□□ -2.35
CDC42P60953 AL031775.1-201ENST00000607014 887 ntBASIC0.4□□□□□ -2.35
CDC42P60953 AC008250.2-201ENST00000615261 205 ntBASIC0.4□□□□□ -2.35
CDC42P60953 AL445984.1-201ENST00000637834 659 ntBASIC0.4□□□□□ -2.35
CDC42P60953 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CDC42P60953 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CDC42P60953 Y_RNA.22-201ENST00000362492 102 ntBASIC0.39□□□□□ -2.35
CDC42P60953 Y_RNA.164-201ENST00000363709 102 ntBASIC0.39□□□□□ -2.35
CDC42P60953 RNU6-1235P-201ENST00000384559 107 ntBASIC0.39□□□□□ -2.35
CDC42P60953 Y_RNA.576-201ENST00000384781 102 ntBASIC0.39□□□□□ -2.35
CDC42P60953 RN7SKP200-201ENST00000410564 320 ntBASIC0.39□□□□□ -2.35
CDC42P60953 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
CDC42P60953 AC010154.1-201ENST00000425857 269 ntBASIC0.39□□□□□ -2.35
CDC42P60953 HMGN2P34-201ENST00000437647 269 ntBASIC0.39□□□□□ -2.35
CDC42P60953 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.39□□□□□ -2.35
CDC42P60953 AL162395.1-201ENST00000457882 422 ntBASIC0.39□□□□□ -2.35
CDC42P60953 RNU6-498P-201ENST00000459468 107 ntBASIC0.39□□□□□ -2.35
CDC42P60953 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.39□□□□□ -2.35
CDC42P60953 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.39□□□□□ -2.35
CDC42P60953 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.39□□□□□ -2.35
CDC42P60953 AL359697.1-201ENST00000624879 587 ntBASIC0.39□□□□□ -2.35
CDC42P60953 AL138960.2-201ENST00000625145 535 ntBASIC0.39□□□□□ -2.35
CDC42P60953 RNU6-157P-201ENST00000383957 107 ntBASIC0.38□□□□□ -2.35
CDC42P60953 RNU6-116P-201ENST00000384042 109 ntBASIC0.38□□□□□ -2.35
CDC42P60953 RNU6-533P-201ENST00000384144 107 ntBASIC0.38□□□□□ -2.35
CDC42P60953 RNU6-505P-201ENST00000384427 107 ntBASIC0.38□□□□□ -2.35
CDC42P60953 Y_RNA.504-201ENST00000384481 104 ntBASIC0.38□□□□□ -2.35
CDC42P60953 RNU6-417P-201ENST00000384712 107 ntBASIC0.38□□□□□ -2.35
CDC42P60953 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
CDC42P60953 RNA5SP323-201ENST00000391094 133 ntBASIC0.38□□□□□ -2.35
CDC42P60953 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.38□□□□□ -2.35
CDC42P60953 AC090960.1-201ENST00000421072 306 ntBASIC0.38□□□□□ -2.35
CDC42P60953 AC012306.1-201ENST00000423267 114 ntBASIC0.38□□□□□ -2.35
CDC42P60953 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
CDC42P60953 RPS26P48-201ENST00000491713 339 ntBASIC0.38□□□□□ -2.35
CDC42P60953 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.38□□□□□ -2.35
CDC42P60953 SNORA31.10-201ENST00000516482 106 ntBASIC0.38□□□□□ -2.35
CDC42P60953 AP003181.2-201ENST00000528941 181 ntBASIC0.38□□□□□ -2.35
CDC42P60953 AL390123.1-201ENST00000603216 237 ntBASIC0.38□□□□□ -2.35
CDC42P60953 AC023934.1-201ENST00000574529 2389 ntBASIC0.37□□□□□ -2.35
CDC42P60953 Y_RNA.18-201ENST00000362461 102 ntBASIC0.37□□□□□ -2.35
CDC42P60953 SNORD115-7-201ENST00000365306 82 ntBASIC0.37□□□□□ -2.35
CDC42P60953 RNU6-975P-201ENST00000384296 105 ntBASIC0.37□□□□□ -2.35
CDC42P60953 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.37□□□□□ -2.35
CDC42P60953 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.37□□□□□ -2.35
CDC42P60953 AC098869.1-201ENST00000481627 292 ntBASIC0.37□□□□□ -2.35
CDC42P60953 AC116562.3-201ENST00000506136 177 ntBASIC0.37□□□□□ -2.35
CDC42P60953 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.37□□□□□ -2.35
CDC42P60953 LRRC34P2-201ENST00000514850 553 ntBASIC0.37□□□□□ -2.35
CDC42P60953 AC068587.5-201ENST00000528506 175 ntBASIC0.37□□□□□ -2.35
CDC42P60953 AC007834.2-201ENST00000536310 343 ntBASIC0.37□□□□□ -2.35
CDC42P60953 AL512605.2-201ENST00000592972 256 ntBASIC0.37□□□□□ -2.35
CDC42P60953 AC091805.2-201ENST00000603848 235 ntBASIC0.37□□□□□ -2.35
CDC42P60953 AC069431.2-201ENST00000604149 1099 ntBASIC0.37□□□□□ -2.35
CDC42P60953 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
CDC42P60953 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.37□□□□□ -2.35
CDC42P60953 AL513423.1-201ENST00000621695 132 ntBASIC0.37□□□□□ -2.35
CDC42P60953 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CDC42P60953 RNA5SP499-201ENST00000363982 119 ntBASIC0.36□□□□□ -2.35
CDC42P60953 Y_RNA.287-201ENST00000364853 94 ntBASIC0.36□□□□□ -2.35
CDC42P60953 SNORA36A-201ENST00000384221 132 ntBASIC0.36□□□□□ -2.35
CDC42P60953 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CDC42P60953 MIR653-201ENST00000385279 96 ntBASIC0.36□□□□□ -2.35
CDC42P60953 RNU6-1093P-201ENST00000391194 107 ntBASIC0.36□□□□□ -2.35
CDC42P60953 RNA5SP467-201ENST00000391274 118 ntBASIC0.36□□□□□ -2.35
CDC42P60953 Y_RNA.608-201ENST00000410647 95 ntBASIC0.36□□□□□ -2.35
CDC42P60953 AL117339.3-201ENST00000418733 162 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms