Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC091435.1-201ENST00000505442 584 ntBASIC1.26□□□□□ -2.21
VSX2P58304 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VSX2P58304 RNU5F-4P-201ENST00000516581 114 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AC069113.1-201ENST00000517763 267 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.26□□□□□ -2.21
VSX2P58304 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.26□□□□□ -2.21
VSX2P58304 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.26□□□□□ -2.21
VSX2P58304 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AC090517.1-201ENST00000569307 266 ntBASIC1.26□□□□□ -2.21
VSX2P58304 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.26□□□□□ -2.21
VSX2P58304 AC009994.1-201ENST00000606889 253 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AC009509.4-201ENST00000619202 509 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
VSX2P58304 AC095038.3-201ENST00000634439 195 ntBASIC1.26□□□□□ -2.21
VSX2P58304 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VSX2P58304 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
VSX2P58304 Y_RNA.255-201ENST00000364581 97 ntBASIC1.25□□□□□ -2.21
VSX2P58304 RNU4-56P-201ENST00000364700 142 ntBASIC1.25□□□□□ -2.21
VSX2P58304 SNORD31B-201ENST00000364977 69 ntBASIC1.25□□□□□ -2.21
VSX2P58304 Y_RNA.409-201ENST00000383990 98 ntBASIC1.25□□□□□ -2.21
VSX2P58304 RNU6-418P-201ENST00000384035 107 ntBASIC1.25□□□□□ -2.21
VSX2P58304 RNU5A-6P-201ENST00000384136 116 ntBASIC1.25□□□□□ -2.21
VSX2P58304 Y_RNA.553-201ENST00000384670 102 ntBASIC1.25□□□□□ -2.21
VSX2P58304 RNU6-1093P-201ENST00000391194 107 ntBASIC1.25□□□□□ -2.21
VSX2P58304 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
VSX2P58304 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VSX2P58304 AC073464.1-201ENST00000429823 534 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC002486.1-201ENST00000435098 391 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.25□□□□□ -2.21
VSX2P58304 RPL9P9-202ENST00000466501 579 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC098862.1-201ENST00000504991 413 ntBASIC1.25□□□□□ -2.21
VSX2P58304 SNORA14.1-201ENST00000516113 141 ntBASIC1.25□□□□□ -2.21
VSX2P58304 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.25□□□□□ -2.21
VSX2P58304 Y_RNA.673-201ENST00000516306 88 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.25□□□□□ -2.21
VSX2P58304 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.25□□□□□ -2.21
VSX2P58304 AL158211.1-201ENST00000566763 763 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC006362.1-201ENST00000567392 174 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC008088.1-201ENST00000580993 280 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC087683.1-201ENST00000591187 441 ntBASIC1.25□□□□□ -2.21
VSX2P58304 CTHRC1P1-201ENST00000605383 469 ntBASIC1.25□□□□□ -2.21
VSX2P58304 AC005520.5-201ENST00000613926 164 ntBASIC1.25□□□□□ -2.21
VSX2P58304 MIR8074-201ENST00000615081 81 ntBASIC1.25□□□□□ -2.21
VSX2P58304 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.25□□□□□ -2.21
VSX2P58304 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
VSX2P58304 AL159152.1-201ENST00000635019 2587 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AP000568.1-201ENST00000282964 442 ntBASIC1.24□□□□□ -2.21
VSX2P58304 RNU1-76P-201ENST00000362903 159 ntBASIC1.24□□□□□ -2.21
VSX2P58304 RNU6-271P-201ENST00000363858 105 ntBASIC1.24□□□□□ -2.21
VSX2P58304 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
VSX2P58304 Y_RNA.378-201ENST00000365652 113 ntBASIC1.24□□□□□ -2.21
VSX2P58304 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.24□□□□□ -2.21
VSX2P58304 SNORA18.2-201ENST00000383865 132 ntBASIC1.24□□□□□ -2.21
VSX2P58304 DEFB108C-201ENST00000400154 252 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AL606923.1-201ENST00000406616 190 ntBASIC1.24□□□□□ -2.21
VSX2P58304 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AC245047.4-201ENST00000433189 144 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.24□□□□□ -2.21
VSX2P58304 MTCO2P18-201ENST00000457151 658 ntBASIC1.24□□□□□ -2.21
VSX2P58304 TPTE2P5-203ENST00000458118 728 ntBASIC1.24□□□□□ -2.21
VSX2P58304 TPT1P7-201ENST00000458300 517 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AC016925.1-201ENST00000458303 298 ntBASIC1.24□□□□□ -2.21
VSX2P58304 snoU13.30-201ENST00000458951 104 ntBASIC1.24□□□□□ -2.21
VSX2P58304 HMGN2P9-201ENST00000476875 229 ntBASIC1.24□□□□□ -2.21
VSX2P58304 RNU6-612P-201ENST00000516909 102 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.24□□□□□ -2.21
VSX2P58304 AC083806.3-201ENST00000614016 455 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AC008147.4-201ENST00000617570 1204 ntBASIC1.24□□□□□ -2.21
VSX2P58304 AC078883.4-201ENST00000623218 367 ntBASIC1.24□□□□□ -2.21
VSX2P58304 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.24□□□□□ -2.21
VSX2P58304 AC009541.1-201ENST00000438279 2662 ntBASIC1.24□□□□□ -2.21
VSX2P58304 Y_RNA.1-201ENST00000352915 104 ntBASIC1.23□□□□□ -2.21
VSX2P58304 RNU6-38P-201ENST00000384085 107 ntBASIC1.23□□□□□ -2.21
VSX2P58304 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
VSX2P58304 MIR548B-201ENST00000385247 97 ntBASIC1.23□□□□□ -2.21
VSX2P58304 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.23□□□□□ -2.21
VSX2P58304 MTND3P9-201ENST00000429526 346 ntBASIC1.23□□□□□ -2.21
VSX2P58304 C8orf59P1-201ENST00000429930 303 ntBASIC1.23□□□□□ -2.21
VSX2P58304 RNU7-138P-201ENST00000459479 64 ntBASIC1.23□□□□□ -2.21
VSX2P58304 RPS3AP17-201ENST00000472594 777 ntBASIC1.23□□□□□ -2.21
VSX2P58304 RPS23P5-201ENST00000495419 428 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AC108078.1-201ENST00000508073 725 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AC079140.3-201ENST00000511111 550 ntBASIC1.23□□□□□ -2.21
VSX2P58304 RNA5SP437-201ENST00000517249 129 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.23□□□□□ -2.21
VSX2P58304 AC104576.1-201ENST00000524225 88 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.23□□□□□ -2.21
VSX2P58304 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.23□□□□□ -2.21
VSX2P58304 MRPS36P4-201ENST00000534436 298 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.23□□□□□ -2.21
VSX2P58304 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.23□□□□□ -2.21
VSX2P58304 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.23□□□□□ -2.21
VSX2P58304 AC004223.2-201ENST00000590309 544 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AC073648.5-201ENST00000603502 305 ntBASIC1.23□□□□□ -2.21
VSX2P58304 AL121757.2-201ENST00000611223 313 ntBASIC1.23□□□□□ -2.21
VSX2P58304 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
VSX2P58304 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VSX2P58304 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms