Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 7SK.13-201ENST00000622040 250 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AC009033.1-201ENST00000624279 431 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AL450472.1-202ENST00000637286 180 ntBASIC1.06□□□□□ -2.24
CLDN18P56856 AC009541.1-201ENST00000438279 2662 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLDN18P56856 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CLDN18P56856 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.05□□□□□ -2.24
CLDN18P56856 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 AC010486.2-201ENST00000505572 483 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 ARL2BPP4-201ENST00000506854 471 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 AC067942.3-201ENST00000512025 362 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 RN7SKP179-201ENST00000516126 217 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 SNORA18.6-201ENST00000516792 115 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CLDN18P56856 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.05□□□□□ -2.24
CLDN18P56856 MIR3941-201ENST00000582572 103 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 NIFKP6-201ENST00000598115 845 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 AC005520.5-201ENST00000613926 164 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 AC122133.1-201ENST00000613964 233 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 MIR8070-201ENST00000616510 88 ntBASIC1.05□□□□□ -2.24
CLDN18P56856 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDN18P56856 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDN18P56856 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDN18P56856 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.04□□□□□ -2.24
CLDN18P56856 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.04□□□□□ -2.24
CLDN18P56856 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.04□□□□□ -2.24
CLDN18P56856 SNRPFP3-201ENST00000457792 225 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 GMFBP1-201ENST00000467831 427 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 RNU6-1129P-201ENST00000515964 104 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 AL512310.8-201ENST00000550183 120 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 AC008015.1-201ENST00000555505 465 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 AGGF1P4-201ENST00000568249 801 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.04□□□□□ -2.24
CLDN18P56856 MZT1P2-201ENST00000604387 248 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 CTHRC1P1-201ENST00000605383 469 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 AC080078.3-201ENST00000605407 463 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 AC087683.2-201ENST00000611384 326 ntBASIC1.04□□□□□ -2.24
CLDN18P56856 BX322639.1-202ENST00000423987 2213 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLDN18P56856 RNU6-562P-201ENST00000362731 107 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 RNU1-22P-201ENST00000363334 158 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 SNORA72.2-201ENST00000365028 127 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
CLDN18P56856 AL117342.1-201ENST00000404861 406 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 MIR1283-1-201ENST00000408494 87 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 RNU2-9P-201ENST00000410194 145 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.03□□□□□ -2.24
CLDN18P56856 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.03□□□□□ -2.24
CLDN18P56856 C1DP4-201ENST00000455429 424 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 snoU13.6-201ENST00000458785 104 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 RNU6-948P-201ENST00000516374 107 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 RNU6-759P-201ENST00000516740 103 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 AP002963.1-201ENST00000530590 184 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 AC064872.1-201ENST00000604823 1072 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 AC004492.1-201ENST00000607036 742 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 AC008536.2-201ENST00000607284 349 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 AC104458.1-201ENST00000608243 463 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 U2.17-201ENST00000611454 95 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 AL359697.1-201ENST00000624879 587 ntBASIC1.03□□□□□ -2.24
CLDN18P56856 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.03□□□□□ -2.24
CLDN18P56856 Y_RNA.238-201ENST00000364441 102 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 SNORA4.2-201ENST00000365313 147 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 RNU2-29P-201ENST00000410423 189 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.02□□□□□ -2.25
CLDN18P56856 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.02□□□□□ -2.25
CLDN18P56856 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 USP9YP14-201ENST00000430663 563 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.02□□□□□ -2.25
CLDN18P56856 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.02□□□□□ -2.25
CLDN18P56856 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.02□□□□□ -2.25
CLDN18P56856 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.02□□□□□ -2.25
CLDN18P56856 RNU2-34P-201ENST00000516534 121 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 MIR5006-201ENST00000583027 110 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.02□□□□□ -2.25
CLDN18P56856 AC079248.2-201ENST00000623779 326 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 SNORA43.4-201ENST00000629559 138 ntBASIC1.02□□□□□ -2.25
CLDN18P56856 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CLDN18P56856 RNU6-553P-201ENST00000364047 96 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 RNU6-282P-201ENST00000365357 103 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CLDN18P56856 RNA5SP323-201ENST00000391094 133 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 MIR1253-201ENST00000408273 105 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 RNA5SP247-201ENST00000411181 105 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 CYCSP46-201ENST00000423569 204 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 AC133104.1-201ENST00000429100 218 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 HMGN2P34-201ENST00000437647 269 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.01□□□□□ -2.25
CLDN18P56856 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.01□□□□□ -2.25
CLDN18P56856 RNU7-167P-201ENST00000459160 62 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 AC114982.1-201ENST00000469402 321 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 COX6CP14-201ENST00000469580 174 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 HMGN1P12-201ENST00000499125 195 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 AC105417.1-201ENST00000514691 285 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 RNU6-1146P-201ENST00000516282 102 ntBASIC1.01□□□□□ -2.25
CLDN18P56856 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.01□□□□□ -2.25
CLDN18P56856 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.01□□□□□ -2.25
CLDN18P56856 AC005562.2-201ENST00000618264 111 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms