Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 USP9YP30-201ENST00000430729 455 ntBASIC2.09□□□□□ -2.07
CDH13P55290 AL035666.1-201ENST00000446195 348 ntBASIC2.09□□□□□ -2.07
CDH13P55290 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
CDH13P55290 RPS23P5-201ENST00000495419 428 ntBASIC2.09□□□□□ -2.07
CDH13P55290 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH13P55290 RNA5SP200-201ENST00000516360 103 ntBASIC2.09□□□□□ -2.07
CDH13P55290 RNU5F-4P-201ENST00000516581 114 ntBASIC2.09□□□□□ -2.07
CDH13P55290 Y_RNA.691-201ENST00000516611 103 ntBASIC2.09□□□□□ -2.07
CDH13P55290 RNU6-1098P-201ENST00000516772 96 ntBASIC2.09□□□□□ -2.07
CDH13P55290 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH13P55290 AC087441.2-201ENST00000529141 262 ntBASIC2.09□□□□□ -2.07
CDH13P55290 RMST_6.1-201ENST00000611980 203 ntBASIC2.09□□□□□ -2.07
CDH13P55290 AL359697.1-201ENST00000624879 587 ntBASIC2.09□□□□□ -2.07
CDH13P55290 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH13P55290 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
CDH13P55290 AL596028.1-201ENST00000326971 197 ntBASIC2.08□□□□□ -2.08
CDH13P55290 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
CDH13P55290 SNORD31B-201ENST00000364977 69 ntBASIC2.08□□□□□ -2.08
CDH13P55290 Y_RNA.482-201ENST00000384377 111 ntBASIC2.08□□□□□ -2.08
CDH13P55290 AC243428.1-201ENST00000421099 264 ntBASIC2.08□□□□□ -2.08
CDH13P55290 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
CDH13P55290 RPS3AP52-201ENST00000435639 297 ntBASIC2.08□□□□□ -2.08
CDH13P55290 HMGB1P18-201ENST00000438801 619 ntBASIC2.08□□□□□ -2.08
CDH13P55290 RPL23AP7-203ENST00000449021 469 ntBASIC2.08□□□□□ -2.08
CDH13P55290 RNU6-991P-201ENST00000516168 107 ntBASIC2.08□□□□□ -2.08
CDH13P55290 RNU6-1198P-201ENST00000516904 67 ntBASIC2.08□□□□□ -2.08
CDH13P55290 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH13P55290 RPS3AP23-202ENST00000574601 686 ntBASIC2.08□□□□□ -2.08
CDH13P55290 7SK.7-201ENST00000603504 247 ntBASIC2.08□□□□□ -2.08
CDH13P55290 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.08□□□□□ -2.08
CDH13P55290 AC018462.2-201ENST00000605375 395 ntBASIC2.08□□□□□ -2.08
CDH13P55290 TCL6_2.1-201ENST00000615162 119 ntBASIC2.08□□□□□ -2.08
CDH13P55290 AC005562.2-201ENST00000618264 111 ntBASIC2.08□□□□□ -2.08
CDH13P55290 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH13P55290 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH13P55290 RNU6-137P-201ENST00000363680 108 ntBASIC2.07□□□□□ -2.08
CDH13P55290 U8.10-201ENST00000384260 133 ntBASIC2.07□□□□□ -2.08
CDH13P55290 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
CDH13P55290 RNA5SP465-201ENST00000391195 109 ntBASIC2.07□□□□□ -2.08
CDH13P55290 RPL37P10-201ENST00000412884 288 ntBASIC2.07□□□□□ -2.08
CDH13P55290 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH13P55290 AC098614.3-201ENST00000438957 440 ntBASIC2.07□□□□□ -2.08
CDH13P55290 MTND3P10-201ENST00000450967 341 ntBASIC2.07□□□□□ -2.08
CDH13P55290 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
CDH13P55290 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH13P55290 snoU13.30-201ENST00000458951 104 ntBASIC2.07□□□□□ -2.08
CDH13P55290 AC026782.1-201ENST00000512952 449 ntBASIC2.07□□□□□ -2.08
CDH13P55290 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
CDH13P55290 RNA5SP54-201ENST00000516951 92 ntBASIC2.07□□□□□ -2.08
CDH13P55290 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH13P55290 AC016727.2-201ENST00000603988 621 ntBASIC2.07□□□□□ -2.08
CDH13P55290 SNRPGP20-201ENST00000604477 205 ntBASIC2.07□□□□□ -2.08
CDH13P55290 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH13P55290 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
CDH13P55290 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
CDH13P55290 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH13P55290 IGHVIII-44-202ENST00000636235 289 ntBASIC2.07□□□□□ -2.08
CDH13P55290 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CDH13P55290 BX322639.1-202ENST00000423987 2213 ntBASIC2.07□□□□□ -2.08
CDH13P55290 ZNF299P-201ENST00000406845 1804 ntBASIC2.07□□□□□ -2.08
CDH13P55290 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDH13P55290 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
CDH13P55290 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CDH13P55290 MIR449A-201ENST00000362113 91 ntBASIC2.06□□□□□ -2.08
CDH13P55290 RNU6-1164P-201ENST00000364428 107 ntBASIC2.06□□□□□ -2.08
CDH13P55290 SNORA18.2-201ENST00000383865 132 ntBASIC2.06□□□□□ -2.08
CDH13P55290 RNU6-842P-201ENST00000384269 107 ntBASIC2.06□□□□□ -2.08
CDH13P55290 MIR153-2-201ENST00000385225 87 ntBASIC2.06□□□□□ -2.08
CDH13P55290 MIR320B2-201ENST00000408479 138 ntBASIC2.06□□□□□ -2.08
CDH13P55290 PDCL2P1-201ENST00000419302 352 ntBASIC2.06□□□□□ -2.08
CDH13P55290 AC123900.1-201ENST00000420390 96 ntBASIC2.06□□□□□ -2.08
CDH13P55290 AC027124.2-201ENST00000428249 105 ntBASIC2.06□□□□□ -2.08
CDH13P55290 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH13P55290 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
CDH13P55290 RN7SKP210-201ENST00000459176 261 ntBASIC2.06□□□□□ -2.08
CDH13P55290 RNU7-14P-201ENST00000459331 62 ntBASIC2.06□□□□□ -2.08
CDH13P55290 TOMM22P6-201ENST00000465035 409 ntBASIC2.06□□□□□ -2.08
CDH13P55290 AC116353.2-201ENST00000505332 712 ntBASIC2.06□□□□□ -2.08
CDH13P55290 ATP5EP1-201ENST00000510257 156 ntBASIC2.06□□□□□ -2.08
CDH13P55290 RNU2-44P-201ENST00000516795 194 ntBASIC2.06□□□□□ -2.08
CDH13P55290 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH13P55290 AC010928.2-201ENST00000588017 287 ntBASIC2.06□□□□□ -2.08
CDH13P55290 AC007229.1-201ENST00000590455 412 ntBASIC2.06□□□□□ -2.08
CDH13P55290 AC011494.1-201ENST00000596454 237 ntBASIC2.06□□□□□ -2.08
CDH13P55290 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH13P55290 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH13P55290 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.06□□□□□ -2.08
CDH13P55290 AC005858.4-201ENST00000623191 700 ntBASIC2.06□□□□□ -2.08
CDH13P55290 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH13P55290 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDH13P55290 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDH13P55290 RNU1-58P-201ENST00000362413 163 ntBASIC2.05□□□□□ -2.08
CDH13P55290 RNU4-82P-201ENST00000362443 140 ntBASIC2.05□□□□□ -2.08
CDH13P55290 Y_RNA.184-201ENST00000363884 108 ntBASIC2.05□□□□□ -2.08
CDH13P55290 RNU6-595P-201ENST00000363944 107 ntBASIC2.05□□□□□ -2.08
CDH13P55290 RNU6-438P-201ENST00000365561 103 ntBASIC2.05□□□□□ -2.08
CDH13P55290 Y_RNA.390-201ENST00000383932 102 ntBASIC2.05□□□□□ -2.08
CDH13P55290 RNU6-160P-201ENST00000384591 107 ntBASIC2.05□□□□□ -2.08
CDH13P55290 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
CDH13P55290 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms