Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 Y_RNA.455-201ENST00000384230 98 ntBASIC2.45□□□□□ -2.02
CDH12P55289 RNU6-541P-201ENST00000384709 110 ntBASIC2.45□□□□□ -2.02
CDH12P55289 MIR10B-201ENST00000385011 110 ntBASIC2.45□□□□□ -2.02
CDH12P55289 RNU6-159P-201ENST00000391080 106 ntBASIC2.45□□□□□ -2.02
CDH12P55289 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH12P55289 EIF1P2-201ENST00000428233 350 ntBASIC2.45□□□□□ -2.02
CDH12P55289 WARS2P1-201ENST00000429678 537 ntBASIC2.45□□□□□ -2.02
CDH12P55289 AC087499.2-201ENST00000432861 149 ntBASIC2.45□□□□□ -2.02
CDH12P55289 UBBP3-201ENST00000445497 241 ntBASIC2.45□□□□□ -2.02
CDH12P55289 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH12P55289 RNU6-1114P-201ENST00000516022 107 ntBASIC2.45□□□□□ -2.02
CDH12P55289 AC040926.1-201ENST00000530195 238 ntBASIC2.45□□□□□ -2.02
CDH12P55289 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH12P55289 AC027176.1-201ENST00000560204 514 ntBASIC2.45□□□□□ -2.02
CDH12P55289 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH12P55289 AL713866.2-201ENST00000603579 219 ntBASIC2.45□□□□□ -2.02
CDH12P55289 AC016727.2-201ENST00000603988 621 ntBASIC2.45□□□□□ -2.02
CDH12P55289 AC093732.2-201ENST00000607950 274 ntBASIC2.45□□□□□ -2.02
CDH12P55289 AC243829.7-201ENST00000633081 225 ntBASIC2.45□□□□□ -2.02
CDH12P55289 MIR7157-201ENST00000635801 60 ntBASIC2.45□□□□□ -2.02
CDH12P55289 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CDH12P55289 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CDH12P55289 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDH12P55289 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.44□□□□□ -2.02
CDH12P55289 AC069528.2-201ENST00000624849 1991 ntBASIC2.44□□□□□ -2.02
CDH12P55289 MIR208A-201ENST00000362287 71 ntBASIC2.44□□□□□ -2.02
CDH12P55289 Y_RNA.153-201ENST00000363615 91 ntBASIC2.44□□□□□ -2.02
CDH12P55289 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
CDH12P55289 SNORD14.1-201ENST00000365609 90 ntBASIC2.44□□□□□ -2.02
CDH12P55289 Y_RNA.424-201ENST00000384063 103 ntBASIC2.44□□□□□ -2.02
CDH12P55289 Y_RNA.459-201ENST00000384251 102 ntBASIC2.44□□□□□ -2.02
CDH12P55289 MIR628-201ENST00000385229 95 ntBASIC2.44□□□□□ -2.02
CDH12P55289 SNORA46.1-201ENST00000391069 153 ntBASIC2.44□□□□□ -2.02
CDH12P55289 U6atac.2-201ENST00000408644 118 ntBASIC2.44□□□□□ -2.02
CDH12P55289 SNORA11-201ENST00000408789 128 ntBASIC2.44□□□□□ -2.02
CDH12P55289 RNA5SP21-201ENST00000410917 96 ntBASIC2.44□□□□□ -2.02
CDH12P55289 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.44□□□□□ -2.02
CDH12P55289 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CDH12P55289 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.44□□□□□ -2.02
CDH12P55289 U8.20-201ENST00000459445 131 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.44□□□□□ -2.02
CDH12P55289 AC007215.1-201ENST00000464893 276 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AC090515.1-201ENST00000465295 476 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AC022868.1-201ENST00000517767 391 ntBASIC2.44□□□□□ -2.02
CDH12P55289 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AP002770.2-201ENST00000543613 532 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AC079600.2-201ENST00000550076 130 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AL442163.3-201ENST00000554110 156 ntBASIC2.44□□□□□ -2.02
CDH12P55289 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH12P55289 AC105245.1-201ENST00000581934 244 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AC125232.2-201ENST00000592457 143 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.44□□□□□ -2.02
CDH12P55289 AL138963.2-201ENST00000605137 226 ntBASIC2.44□□□□□ -2.02
CDH12P55289 AL078596.1-201ENST00000624856 447 ntBASIC2.44□□□□□ -2.02
CDH12P55289 RNU6-1301P-201ENST00000362724 104 ntBASIC2.43□□□□□ -2.02
CDH12P55289 RNU6-137P-201ENST00000363680 108 ntBASIC2.43□□□□□ -2.02
CDH12P55289 RNU6-461P-201ENST00000364195 107 ntBASIC2.43□□□□□ -2.02
CDH12P55289 RNU6-318P-201ENST00000384283 103 ntBASIC2.43□□□□□ -2.02
CDH12P55289 SNORA12-201ENST00000391162 147 ntBASIC2.43□□□□□ -2.02
CDH12P55289 AL356057.3-201ENST00000402607 340 ntBASIC2.43□□□□□ -2.02
CDH12P55289 HMGB3P2-201ENST00000411913 584 ntBASIC2.43□□□□□ -2.02
CDH12P55289 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.43□□□□□ -2.02
CDH12P55289 AC096638.1-201ENST00000444678 216 ntBASIC2.43□□□□□ -2.02
CDH12P55289 MTND5P22-201ENST00000458380 195 ntBASIC2.43□□□□□ -2.02
CDH12P55289 AC093852.1-201ENST00000503587 266 ntBASIC2.43□□□□□ -2.02
CDH12P55289 Y_RNA.721-201ENST00000517207 102 ntBASIC2.43□□□□□ -2.02
CDH12P55289 EIF4A1P12-201ENST00000551910 141 ntBASIC2.43□□□□□ -2.02
CDH12P55289 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CDH12P55289 MIR5695-201ENST00000579717 85 ntBASIC2.43□□□□□ -2.02
CDH12P55289 AC124312.5-201ENST00000604451 268 ntBASIC2.43□□□□□ -2.02
CDH12P55289 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CDH12P55289 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDH12P55289 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.43□□□□□ -2.02
CDH12P55289 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH12P55289 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
CDH12P55289 AC026241.1-201ENST00000517873 2142 ntBASIC2.42□□□□□ -2.02
CDH12P55289 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH12P55289 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CDH12P55289 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CDH12P55289 ZNF204P-201ENST00000416749 2397 ntBASIC2.42□□□□□ -2.02
CDH12P55289 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH12P55289 RNA5SP361-201ENST00000362686 118 ntBASIC2.42□□□□□ -2.02
CDH12P55289 RNU6-873P-201ENST00000363833 107 ntBASIC2.42□□□□□ -2.02
CDH12P55289 RNU6-281P-201ENST00000384212 103 ntBASIC2.42□□□□□ -2.02
CDH12P55289 SNORA51.11-201ENST00000384442 131 ntBASIC2.42□□□□□ -2.02
CDH12P55289 RNU6-1274P-201ENST00000384557 107 ntBASIC2.42□□□□□ -2.02
CDH12P55289 RNU6-101P-201ENST00000410323 104 ntBASIC2.42□□□□□ -2.02
CDH12P55289 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.42□□□□□ -2.02
CDH12P55289 MTCO3P19-201ENST00000415864 321 ntBASIC2.42□□□□□ -2.02
CDH12P55289 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH12P55289 RPS3AP12-201ENST00000443616 753 ntBASIC2.42□□□□□ -2.02
CDH12P55289 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH12P55289 MTCO3P8-201ENST00000453691 755 ntBASIC2.42□□□□□ -2.02
CDH12P55289 MTATP8P1-201ENST00000467115 207 ntBASIC2.42□□□□□ -2.02
CDH12P55289 AC010469.2-201ENST00000496412 480 ntBASIC2.42□□□□□ -2.02
CDH12P55289 SLC25A15P5-201ENST00000508033 253 ntBASIC2.42□□□□□ -2.02
CDH12P55289 AC023141.11-201ENST00000508864 202 ntBASIC2.42□□□□□ -2.02
CDH12P55289 MIR2355-201ENST00000517199 87 ntBASIC2.42□□□□□ -2.02
CDH12P55289 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH12P55289 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms