Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 HMGB3P2-201ENST00000411913 584 ntBASIC2.16□□□□□ -2.06
CDH11P55287 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH11P55287 AL161788.1-201ENST00000441805 169 ntBASIC2.16□□□□□ -2.06
CDH11P55287 OR2AQ1P-201ENST00000451972 200 ntBASIC2.16□□□□□ -2.06
CDH11P55287 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH11P55287 RN7SKP210-201ENST00000459176 261 ntBASIC2.16□□□□□ -2.06
CDH11P55287 AC145146.1-201ENST00000496370 254 ntBASIC2.16□□□□□ -2.06
CDH11P55287 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH11P55287 AC093303.1-201ENST00000514549 295 ntBASIC2.16□□□□□ -2.06
CDH11P55287 RNU6-470P-201ENST00000515954 104 ntBASIC2.16□□□□□ -2.06
CDH11P55287 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.16□□□□□ -2.06
CDH11P55287 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH11P55287 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH11P55287 AL590705.4-201ENST00000532209 134 ntBASIC2.16□□□□□ -2.06
CDH11P55287 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH11P55287 SUB1P3-201ENST00000564581 315 ntBASIC2.16□□□□□ -2.06
CDH11P55287 AC104581.2-201ENST00000572227 430 ntBASIC2.16□□□□□ -2.06
CDH11P55287 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
CDH11P55287 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH11P55287 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDH11P55287 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
CDH11P55287 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.16□□□□□ -2.06
CDH11P55287 AC073544.1-201ENST00000600110 1595 ntBASIC2.15□□□□□ -2.06
CDH11P55287 MTND4P29-201ENST00000503122 1372 ntBASIC2.15□□□□□ -2.07
CDH11P55287 SNORD42.2-201ENST00000365570 69 ntBASIC2.15□□□□□ -2.07
CDH11P55287 RNU6-17P-201ENST00000384245 107 ntBASIC2.15□□□□□ -2.07
CDH11P55287 RNU6-18P-201ENST00000384527 107 ntBASIC2.15□□□□□ -2.07
CDH11P55287 MIR518C-201ENST00000384822 101 ntBASIC2.15□□□□□ -2.07
CDH11P55287 MIR487A-201ENST00000385009 80 ntBASIC2.15□□□□□ -2.07
CDH11P55287 RNU2-48P-201ENST00000410694 191 ntBASIC2.15□□□□□ -2.07
CDH11P55287 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH11P55287 MTCO3P29-201ENST00000432119 779 ntBASIC2.15□□□□□ -2.07
CDH11P55287 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH11P55287 AC011753.1-201ENST00000451001 220 ntBASIC2.15□□□□□ -2.07
CDH11P55287 snoU13.30-201ENST00000458951 104 ntBASIC2.15□□□□□ -2.07
CDH11P55287 RPL17P19-201ENST00000489069 552 ntBASIC2.15□□□□□ -2.07
CDH11P55287 AC090096.1-201ENST00000489168 390 ntBASIC2.15□□□□□ -2.07
CDH11P55287 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH11P55287 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.15□□□□□ -2.07
CDH11P55287 RNU6-307P-201ENST00000516743 106 ntBASIC2.15□□□□□ -2.07
CDH11P55287 SNORA48.11-201ENST00000517015 89 ntBASIC2.15□□□□□ -2.07
CDH11P55287 RNU6-586P-201ENST00000517265 104 ntBASIC2.15□□□□□ -2.07
CDH11P55287 CBX3P7-201ENST00000532876 502 ntBASIC2.15□□□□□ -2.07
CDH11P55287 AL590808.1-201ENST00000618696 141 ntBASIC2.15□□□□□ -2.07
CDH11P55287 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.15□□□□□ -2.07
CDH11P55287 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.15□□□□□ -2.07
CDH11P55287 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.07
CDH11P55287 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CDH11P55287 RNU6-874P-201ENST00000362390 105 ntBASIC2.14□□□□□ -2.07
CDH11P55287 RNU6-1115P-201ENST00000362490 106 ntBASIC2.14□□□□□ -2.07
CDH11P55287 RNU1-23P-201ENST00000363361 144 ntBASIC2.14□□□□□ -2.07
CDH11P55287 SNORD115-8-201ENST00000363856 82 ntBASIC2.14□□□□□ -2.07
CDH11P55287 Y_RNA.813-201ENST00000364639 102 ntBASIC2.14□□□□□ -2.07
CDH11P55287 SNORD115-38-201ENST00000365037 82 ntBASIC2.14□□□□□ -2.07
CDH11P55287 RNU6-1040P-201ENST00000383974 107 ntBASIC2.14□□□□□ -2.07
CDH11P55287 SNORA12-201ENST00000391162 147 ntBASIC2.14□□□□□ -2.07
CDH11P55287 MTND4P28-201ENST00000426217 387 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AL353997.1-201ENST00000432936 108 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC007215.1-201ENST00000464893 276 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC068781.1-201ENST00000488231 618 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC018868.1-201ENST00000491307 315 ntBASIC2.14□□□□□ -2.07
CDH11P55287 ANXA2P1-201ENST00000505539 926 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC022493.2-201ENST00000506122 481 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC234781.5-201ENST00000508429 271 ntBASIC2.14□□□□□ -2.07
CDH11P55287 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH11P55287 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
CDH11P55287 RNA5SP24-201ENST00000516478 95 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC109329.2-201ENST00000519658 482 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.14□□□□□ -2.07
CDH11P55287 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
CDH11P55287 SNORD53-201ENST00000579969 78 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.14□□□□□ -2.07
CDH11P55287 RMST_6.1-201ENST00000611980 203 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AL160413.1-201ENST00000622780 310 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC091925.1-201ENST00000623204 462 ntBASIC2.14□□□□□ -2.07
CDH11P55287 AC064859.1-201ENST00000624741 174 ntBASIC2.14□□□□□ -2.07
CDH11P55287 MTND5P10-201ENST00000603719 1809 ntBASIC2.14□□□□□ -2.07
CDH11P55287 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDH11P55287 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH11P55287 RNU4-56P-201ENST00000364700 142 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.395-201ENST00000383945 109 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.405-201ENST00000383979 100 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.451-201ENST00000384200 100 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.460-201ENST00000384255 102 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.463-201ENST00000384271 102 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.524-201ENST00000384564 100 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.561-201ENST00000384694 100 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.597-201ENST00000410463 100 ntBASIC2.13□□□□□ -2.07
CDH11P55287 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
CDH11P55287 RPS20P15-201ENST00000412792 311 ntBASIC2.13□□□□□ -2.07
CDH11P55287 AC009963.1-201ENST00000417265 157 ntBASIC2.13□□□□□ -2.07
CDH11P55287 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.13□□□□□ -2.07
CDH11P55287 CYP2C59P-201ENST00000457790 269 ntBASIC2.13□□□□□ -2.07
CDH11P55287 Y_RNA.639-201ENST00000458981 102 ntBASIC2.13□□□□□ -2.07
CDH11P55287 AC027575.1-201ENST00000481064 460 ntBASIC2.13□□□□□ -2.07
CDH11P55287 HMGN1P13-201ENST00000505795 138 ntBASIC2.13□□□□□ -2.07
CDH11P55287 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.13□□□□□ -2.07
CDH11P55287 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.13□□□□□ -2.07
CDH11P55287 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.13□□□□□ -2.07
CDH11P55287 EIF4A1P12-201ENST00000551910 141 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms