Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RNU6-658P-201ENST00000384606 106 ntBASIC-1.28□□□□□ -2.61
CLTCL1P53675 SNORD83B-201ENST00000386745 93 ntBASIC-1.28□□□□□ -2.61
CLTCL1P53675 MIR454-201ENST00000390180 115 ntBASIC-1.28□□□□□ -2.61
CLTCL1P53675 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
CLTCL1P53675 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.28□□□□□ -2.61
CLTCL1P53675 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.28□□□□□ -2.61
CLTCL1P53675 AC092685.1-201ENST00000447960 1243 ntBASIC-1.28□□□□□ -2.61
CLTCL1P53675 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.28□□□□□ -2.61
CLTCL1P53675 AC138869.1-201ENST00000568623 124 ntBASIC-1.28□□□□□ -2.61
CLTCL1P53675 AC068790.2-201ENST00000602601 557 ntBASIC-1.28□□□□□ -2.61
CLTCL1P53675 DLEU2_6.2-201ENST00000620994 136 ntBASIC-1.28□□□□□ -2.61
CLTCL1P53675 SNORA12.1-201ENST00000390873 148 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-1.29□□□□□ -2.62
CLTCL1P53675 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.29□□□□□ -2.62
CLTCL1P53675 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.29□□□□□ -2.62
CLTCL1P53675 SNORD114-11-201ENST00000363738 75 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AL451046.2-201ENST00000403074 277 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AC002381.1-201ENST00000447049 280 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
CLTCL1P53675 LINC01399-202ENST00000458450 244 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 MTCO3P28-201ENST00000513351 515 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 RNU7-129P-201ENST00000516128 62 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AC023050.3-201ENST00000541142 333 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.29□□□□□ -2.62
CLTCL1P53675 MIR4432-201ENST00000581823 84 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AL391001.1-201ENST00000602747 715 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AL671309.1-201ENST00000603750 544 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 RNU6-94P-201ENST00000607728 107 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AL391903.3-201ENST00000612158 163 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 AC104820.1-201ENST00000624183 307 ntBASIC-1.29□□□□□ -2.62
CLTCL1P53675 Y_RNA.245-201ENST00000364493 95 ntBASIC-1.3□□□□□ -2.62
CLTCL1P53675 MIR29B2-201ENST00000385055 81 ntBASIC-1.3□□□□□ -2.62
CLTCL1P53675 AL049545.1-201ENST00000401856 572 ntBASIC-1.3□□□□□ -2.62
CLTCL1P53675 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.3□□□□□ -2.62
CLTCL1P53675 AC004584.2-201ENST00000570407 410 ntBASIC-1.3□□□□□ -2.62
CLTCL1P53675 MIR4742-201ENST00000581069 85 ntBASIC-1.3□□□□□ -2.62
CLTCL1P53675 AC013476.2-201ENST00000614456 459 ntBASIC-1.3□□□□□ -2.62
CLTCL1P53675 ENSAP3-201ENST00000312710 333 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 SNORD114-14-201ENST00000362723 75 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 SNORD113.3-201ENST00000364630 78 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 MIR520G-201ENST00000385064 90 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 MIR520H-201ENST00000385126 88 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.31□□□□□ -2.62
CLTCL1P53675 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 AC093019.1-201ENST00000443135 252 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 MED28P2-201ENST00000475771 317 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 RNU6-917P-201ENST00000516294 104 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.31□□□□□ -2.62
CLTCL1P53675 AC007014.2-201ENST00000615581 479 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 AL356596.1-201ENST00000624230 379 ntBASIC-1.31□□□□□ -2.62
CLTCL1P53675 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-1.31□□□□□ -2.62
CLTCL1P53675 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.32□□□□□ -2.62
CLTCL1P53675 MTCO1P21-201ENST00000416634 589 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 FAM204CP-201ENST00000424489 642 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 AC107297.1-201ENST00000459991 176 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 AC013828.1-201ENST00000481845 158 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 SNORA27.4-201ENST00000516650 95 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 AC242628.1-201ENST00000606810 391 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 AC091304.9-201ENST00000612091 226 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 AP003400.6-201ENST00000624698 740 ntBASIC-1.32□□□□□ -2.62
CLTCL1P53675 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 MIR760-201ENST00000390220 80 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 CBX3P9-201ENST00000402326 552 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.33□□□□□ -2.62
CLTCL1P53675 SCARNA18-201ENST00000459004 134 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC131159.1-201ENST00000621854 213 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 RNU6-858P-201ENST00000362436 107 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 MTATP6P27-201ENST00000416987 621 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 USP9YP22-201ENST00000438971 294 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.33□□□□□ -2.62
CLTCL1P53675 USP9YP25-201ENST00000457708 443 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC091885.1-201ENST00000506658 268 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.33□□□□□ -2.62
CLTCL1P53675 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-1.33□□□□□ -2.62
CLTCL1P53675 MIR548AO-201ENST00000579992 96 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 MIR4324-201ENST00000584846 72 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AL929325.1-201ENST00000603096 117 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC246785.4-201ENST00000605374 287 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AL355073.2-201ENST00000612106 557 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 AC098679.4-201ENST00000624241 654 ntBASIC-1.33□□□□□ -2.62
CLTCL1P53675 RNU6-444P-201ENST00000383988 108 ntBASIC-1.34□□□□□ -2.62
CLTCL1P53675 SNORD41-201ENST00000386967 70 ntBASIC-1.34□□□□□ -2.62
CLTCL1P53675 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.34□□□□□ -2.62
CLTCL1P53675 ZNF885P-201ENST00000420174 1098 ntBASIC-1.34□□□□□ -2.62
CLTCL1P53675 AL953862.1-201ENST00000423016 168 ntBASIC-1.34□□□□□ -2.62
CLTCL1P53675 AC133104.1-201ENST00000429100 218 ntBASIC-1.34□□□□□ -2.62
CLTCL1P53675 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.34□□□□□ -2.62
CLTCL1P53675 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.34□□□□□ -2.62
CLTCL1P53675 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.34□□□□□ -2.62
CLTCL1P53675 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 MIR186-201ENST00000384988 86 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms