Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC016256.1-201ENST00000547971 354 ntBASIC1.79□□□□□ -2.12
GPC3P51654 AC103996.1-201ENST00000555468 102 ntBASIC1.79□□□□□ -2.12
GPC3P51654 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.79□□□□□ -2.12
GPC3P51654 AC005786.1-201ENST00000588553 154 ntBASIC1.79□□□□□ -2.12
GPC3P51654 RNU6-89P-201ENST00000606519 100 ntBASIC1.79□□□□□ -2.12
GPC3P51654 AC068137.4-201ENST00000638485 296 ntBASIC1.79□□□□□ -2.12
GPC3P51654 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
GPC3P51654 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
GPC3P51654 Y_RNA.41-201ENST00000362646 102 ntBASIC1.78□□□□□ -2.12
GPC3P51654 RNY3P3-201ENST00000363816 102 ntBASIC1.78□□□□□ -2.12
GPC3P51654 RNU4-42P-201ENST00000364738 142 ntBASIC1.78□□□□□ -2.12
GPC3P51654 RNU4-20P-201ENST00000365601 151 ntBASIC1.78□□□□□ -2.12
GPC3P51654 RNU6-128P-201ENST00000383976 107 ntBASIC1.78□□□□□ -2.12
GPC3P51654 BTF3P4-201ENST00000418852 495 ntBASIC1.78□□□□□ -2.12
GPC3P51654 RPL23AP95-201ENST00000426806 265 ntBASIC1.78□□□□□ -2.12
GPC3P51654 HMGN2P18-201ENST00000450680 270 ntBASIC1.78□□□□□ -2.12
GPC3P51654 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.78□□□□□ -2.12
GPC3P51654 AC091435.1-201ENST00000505442 584 ntBASIC1.78□□□□□ -2.12
GPC3P51654 HSPE1P4-201ENST00000550617 308 ntBASIC1.78□□□□□ -2.12
GPC3P51654 AC100830.2-201ENST00000581636 240 ntBASIC1.78□□□□□ -2.12
GPC3P51654 AC010900.2-201ENST00000604508 210 ntBASIC1.78□□□□□ -2.12
GPC3P51654 AP001836.1-201ENST00000604675 523 ntBASIC1.78□□□□□ -2.12
GPC3P51654 AL590240.4-201ENST00000616908 390 ntBASIC1.78□□□□□ -2.12
GPC3P51654 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.78□□□□□ -2.12
GPC3P51654 AL136221.1-201ENST00000621449 509 ntBASIC1.78□□□□□ -2.12
GPC3P51654 Y_RNA.100-201ENST00000363141 102 ntBASIC1.77□□□□□ -2.13
GPC3P51654 RNY4P14-201ENST00000363656 96 ntBASIC1.77□□□□□ -2.13
GPC3P51654 RNU6-1329P-201ENST00000365664 107 ntBASIC1.77□□□□□ -2.13
GPC3P51654 RNU6-692P-201ENST00000384496 107 ntBASIC1.77□□□□□ -2.13
GPC3P51654 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
GPC3P51654 RNU6-1068P-201ENST00000410958 103 ntBASIC1.77□□□□□ -2.13
GPC3P51654 MTCO1P21-201ENST00000416634 589 ntBASIC1.77□□□□□ -2.13
GPC3P51654 MTCO1P20-201ENST00000425366 358 ntBASIC1.77□□□□□ -2.13
GPC3P51654 NDUFA5P4-201ENST00000436704 385 ntBASIC1.77□□□□□ -2.13
GPC3P51654 HMGB1P18-201ENST00000438801 619 ntBASIC1.77□□□□□ -2.13
GPC3P51654 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.77□□□□□ -2.13
GPC3P51654 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.77□□□□□ -2.13
GPC3P51654 MIR449C-201ENST00000516047 92 ntBASIC1.77□□□□□ -2.13
GPC3P51654 Y_RNA.704-201ENST00000516851 102 ntBASIC1.77□□□□□ -2.13
GPC3P51654 AL118558.2-201ENST00000556294 238 ntBASIC1.77□□□□□ -2.13
GPC3P51654 AC021231.3-201ENST00000558497 370 ntBASIC1.77□□□□□ -2.13
GPC3P51654 MIR3169-201ENST00000578032 83 ntBASIC1.77□□□□□ -2.13
GPC3P51654 MIR3923-201ENST00000579521 83 ntBASIC1.77□□□□□ -2.13
GPC3P51654 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
GPC3P51654 MIR5692C1-201ENST00000585309 91 ntBASIC1.77□□□□□ -2.13
GPC3P51654 AC016727.1-205ENST00000605437 569 ntBASIC1.77□□□□□ -2.13
GPC3P51654 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
GPC3P51654 LINC02555-201ENST00000563933 1951 ntBASIC1.77□□□□□ -2.13
GPC3P51654 MIR378A-201ENST00000362177 66 ntBASIC1.76□□□□□ -2.13
GPC3P51654 Y_RNA.3-201ENST00000362331 103 ntBASIC1.76□□□□□ -2.13
GPC3P51654 Y_RNA.6-201ENST00000362350 114 ntBASIC1.76□□□□□ -2.13
GPC3P51654 SNORD113-7-201ENST00000363762 77 ntBASIC1.76□□□□□ -2.13
GPC3P51654 SNORD32A-201ENST00000364805 84 ntBASIC1.76□□□□□ -2.13
GPC3P51654 Y_RNA.338-201ENST00000365320 114 ntBASIC1.76□□□□□ -2.13
GPC3P51654 RNU6-438P-201ENST00000365561 103 ntBASIC1.76□□□□□ -2.13
GPC3P51654 Y_RNA.530-201ENST00000384587 101 ntBASIC1.76□□□□□ -2.13
GPC3P51654 SNORA26.3-201ENST00000391119 136 ntBASIC1.76□□□□□ -2.13
GPC3P51654 SNORA12-201ENST00000391162 147 ntBASIC1.76□□□□□ -2.13
GPC3P51654 RNA5SP118-201ENST00000410385 109 ntBASIC1.76□□□□□ -2.13
GPC3P51654 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
GPC3P51654 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.76□□□□□ -2.13
GPC3P51654 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
GPC3P51654 RNU1-131P-201ENST00000458943 161 ntBASIC1.76□□□□□ -2.13
GPC3P51654 AC008628.2-201ENST00000502605 298 ntBASIC1.76□□□□□ -2.13
GPC3P51654 RNVU1-2-201ENST00000516326 135 ntBASIC1.76□□□□□ -2.13
GPC3P51654 RNU6-1038P-201ENST00000516516 104 ntBASIC1.76□□□□□ -2.13
GPC3P51654 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.76□□□□□ -2.13
GPC3P51654 MIR4498-201ENST00000577599 66 ntBASIC1.76□□□□□ -2.13
GPC3P51654 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.76□□□□□ -2.13
GPC3P51654 AC010525.2-201ENST00000590920 195 ntBASIC1.76□□□□□ -2.13
GPC3P51654 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.76□□□□□ -2.13
GPC3P51654 AF250324.2-201ENST00000608299 610 ntBASIC1.76□□□□□ -2.13
GPC3P51654 AC139792.2-201ENST00000624218 587 ntBASIC1.76□□□□□ -2.13
GPC3P51654 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GPC3P51654 RNU6-227P-201ENST00000362865 103 ntBASIC1.75□□□□□ -2.13
GPC3P51654 Y_RNA.332-201ENST00000365271 113 ntBASIC1.75□□□□□ -2.13
GPC3P51654 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.75□□□□□ -2.13
GPC3P51654 RNU6-1215P-201ENST00000384441 102 ntBASIC1.75□□□□□ -2.13
GPC3P51654 RNA5SP100-201ENST00000410903 110 ntBASIC1.75□□□□□ -2.13
GPC3P51654 RNA5SP59-201ENST00000410922 110 ntBASIC1.75□□□□□ -2.13
GPC3P51654 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.75□□□□□ -2.13
GPC3P51654 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.75□□□□□ -2.13
GPC3P51654 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.75□□□□□ -2.13
GPC3P51654 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.75□□□□□ -2.13
GPC3P51654 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.75□□□□□ -2.13
GPC3P51654 AC016957.1-201ENST00000534895 309 ntBASIC1.75□□□□□ -2.13
GPC3P51654 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.75□□□□□ -2.13
GPC3P51654 AC025423.5-201ENST00000550230 219 ntBASIC1.75□□□□□ -2.13
GPC3P51654 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.75□□□□□ -2.13
GPC3P51654 TPRKBP2-201ENST00000565969 475 ntBASIC1.75□□□□□ -2.13
GPC3P51654 AC109446.1-201ENST00000566172 220 ntBASIC1.75□□□□□ -2.13
GPC3P51654 AC023043.2-201ENST00000589678 1026 ntBASIC1.75□□□□□ -2.13
GPC3P51654 AL645939.4-201ENST00000604495 135 ntBASIC1.75□□□□□ -2.13
GPC3P51654 RPL17P51-201ENST00000605218 238 ntBASIC1.75□□□□□ -2.13
GPC3P51654 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.75□□□□□ -2.13
GPC3P51654 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.75□□□□□ -2.13
GPC3P51654 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
GPC3P51654 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
GPC3P51654 RNU6-451P-201ENST00000362921 107 ntBASIC1.74□□□□□ -2.13
GPC3P51654 RNU6-522P-201ENST00000364497 107 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms