Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNU6-351P-201ENST00000516097 100 ntBASIC0.56□□□□□ -2.32
RPL28P46779 SNORD27.1-201ENST00000516319 72 ntBASIC0.56□□□□□ -2.32
RPL28P46779 RN7SKP49-201ENST00000516675 260 ntBASIC0.56□□□□□ -2.32
RPL28P46779 Vault.3-201ENST00000516676 95 ntBASIC0.56□□□□□ -2.32
RPL28P46779 RNU6-410P-201ENST00000517006 107 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AL929325.1-201ENST00000603096 117 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AL133173.2-201ENST00000614270 90 ntBASIC0.56□□□□□ -2.32
RPL28P46779 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AC010608.3-201ENST00000625048 527 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AP000720.1-201ENST00000625091 483 ntBASIC0.56□□□□□ -2.32
RPL28P46779 AL133216.2-202ENST00000634512 349 ntBASIC0.56□□□□□ -2.32
RPL28P46779 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RPL28P46779 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.55□□□□□ -2.32
RPL28P46779 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
RPL28P46779 RNU4-79P-201ENST00000362764 141 ntBASIC0.55□□□□□ -2.32
RPL28P46779 RNU6-74P-201ENST00000384235 107 ntBASIC0.55□□□□□ -2.32
RPL28P46779 SNORD12-201ENST00000391002 90 ntBASIC0.55□□□□□ -2.32
RPL28P46779 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.55□□□□□ -2.32
RPL28P46779 RNU4-46P-201ENST00000410818 138 ntBASIC0.55□□□□□ -2.32
RPL28P46779 RNU6-1054P-201ENST00000411293 104 ntBASIC0.55□□□□□ -2.32
RPL28P46779 MTCO2P8-201ENST00000412213 658 ntBASIC0.55□□□□□ -2.32
RPL28P46779 AC114482.1-201ENST00000418010 247 ntBASIC0.55□□□□□ -2.32
RPL28P46779 PIGFP2-201ENST00000421400 651 ntBASIC0.55□□□□□ -2.32
RPL28P46779 AC004854.1-201ENST00000440356 349 ntBASIC0.55□□□□□ -2.32
RPL28P46779 AC079781.2-201ENST00000446424 169 ntBASIC0.55□□□□□ -2.32
RPL28P46779 EPS15P1-201ENST00000448836 336 ntBASIC0.55□□□□□ -2.32
RPL28P46779 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.55□□□□□ -2.32
RPL28P46779 AC010486.2-201ENST00000505572 483 ntBASIC0.55□□□□□ -2.32
RPL28P46779 AC079140.5-201ENST00000507882 310 ntBASIC0.55□□□□□ -2.32
RPL28P46779 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.55□□□□□ -2.32
RPL28P46779 SNORA31.2-201ENST00000516019 134 ntBASIC0.55□□□□□ -2.32
RPL28P46779 SNORA31.4-201ENST00000516049 129 ntBASIC0.55□□□□□ -2.32
RPL28P46779 RNU2-69P-201ENST00000516061 100 ntBASIC0.55□□□□□ -2.32
RPL28P46779 RNU6-948P-201ENST00000516374 107 ntBASIC0.55□□□□□ -2.32
RPL28P46779 RNU6-113P-201ENST00000516653 101 ntBASIC0.55□□□□□ -2.32
RPL28P46779 AC024995.1-201ENST00000523014 93 ntBASIC0.55□□□□□ -2.32
RPL28P46779 MTCO3P23-201ENST00000561363 289 ntBASIC0.55□□□□□ -2.32
RPL28P46779 MIR4653-201ENST00000585107 83 ntBASIC0.55□□□□□ -2.32
RPL28P46779 MIR4753-201ENST00000585119 83 ntBASIC0.55□□□□□ -2.32
RPL28P46779 MTCO2P2-201ENST00000591258 225 ntBASIC0.55□□□□□ -2.32
RPL28P46779 AC080078.3-201ENST00000605407 463 ntBASIC0.55□□□□□ -2.32
RPL28P46779 TUSC7.1-201ENST00000610969 165 ntBASIC0.55□□□□□ -2.32
RPL28P46779 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.55□□□□□ -2.32
RPL28P46779 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.55□□□□□ -2.32
RPL28P46779 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.55□□□□□ -2.32
RPL28P46779 SNORD114-24-201ENST00000365029 72 ntBASIC0.54□□□□□ -2.32
RPL28P46779 RNU6-53P-201ENST00000365367 106 ntBASIC0.54□□□□□ -2.32
RPL28P46779 RNU6-975P-201ENST00000384296 105 ntBASIC0.54□□□□□ -2.32
RPL28P46779 RNU6-393P-201ENST00000384475 107 ntBASIC0.54□□□□□ -2.32
RPL28P46779 RNU6-950P-201ENST00000384651 107 ntBASIC0.54□□□□□ -2.32
RPL28P46779 RNA5SP109-201ENST00000391010 116 ntBASIC0.54□□□□□ -2.32
RPL28P46779 RNU2-64P-201ENST00000411315 191 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.54□□□□□ -2.32
RPL28P46779 SSR1P2-201ENST00000415208 787 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AC106883.1-201ENST00000418805 562 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AC090960.1-201ENST00000421072 306 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.54□□□□□ -2.32
RPL28P46779 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.54□□□□□ -2.32
RPL28P46779 RNU7-182P-201ENST00000459009 62 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.54□□□□□ -2.32
RPL28P46779 RNA5SP168-201ENST00000516642 112 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.54□□□□□ -2.32
RPL28P46779 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.54□□□□□ -2.32
RPL28P46779 MIR5695-201ENST00000579717 85 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AC016727.2-201ENST00000603988 621 ntBASIC0.54□□□□□ -2.32
RPL28P46779 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.54□□□□□ -2.32
RPL28P46779 AL359697.1-201ENST00000624879 587 ntBASIC0.54□□□□□ -2.32
RPL28P46779 MIR6866-201ENST00000638146 69 ntBASIC0.54□□□□□ -2.32
RPL28P46779 Y_RNA.287-201ENST00000364853 94 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU6-1080P-201ENST00000383982 107 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU6-434P-201ENST00000384376 107 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU6-1031P-201ENST00000384773 107 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU6-910P-201ENST00000390844 107 ntBASIC0.53□□□□□ -2.32
RPL28P46779 SNORA16.2-201ENST00000390991 127 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU6-1093P-201ENST00000391194 107 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU11-5P-201ENST00000391216 129 ntBASIC0.53□□□□□ -2.32
RPL28P46779 Y_RNA.598-201ENST00000410480 95 ntBASIC0.53□□□□□ -2.32
RPL28P46779 AC063976.4-201ENST00000421971 163 ntBASIC0.53□□□□□ -2.32
RPL28P46779 AC011233.1-201ENST00000422812 283 ntBASIC0.53□□□□□ -2.32
RPL28P46779 GPR143P-201ENST00000434155 205 ntBASIC0.53□□□□□ -2.32
RPL28P46779 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.53□□□□□ -2.32
RPL28P46779 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.53□□□□□ -2.32
RPL28P46779 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.53□□□□□ -2.32
RPL28P46779 AC016717.1-201ENST00000448918 286 ntBASIC0.53□□□□□ -2.32
RPL28P46779 SNORD124-201ENST00000459577 104 ntBASIC0.53□□□□□ -2.32
RPL28P46779 AC092991.1-201ENST00000477176 376 ntBASIC0.53□□□□□ -2.32
RPL28P46779 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.53□□□□□ -2.32
RPL28P46779 PSMC1P5-201ENST00000512850 177 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU6-1146P-201ENST00000516282 102 ntBASIC0.53□□□□□ -2.32
RPL28P46779 SNORA31.10-201ENST00000516482 106 ntBASIC0.53□□□□□ -2.32
RPL28P46779 RNU6-197P-201ENST00000516680 100 ntBASIC0.53□□□□□ -2.32
RPL28P46779 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.53□□□□□ -2.32
RPL28P46779 MTND1P8-201ENST00000571424 950 ntBASIC0.53□□□□□ -2.32
RPL28P46779 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.53□□□□□ -2.32
RPL28P46779 AL390123.1-201ENST00000603216 237 ntBASIC0.53□□□□□ -2.32
RPL28P46779 AC002044.1-201ENST00000606707 158 ntBASIC0.53□□□□□ -2.32
RPL28P46779 AC104458.1-201ENST00000608243 463 ntBASIC0.53□□□□□ -2.32
RPL28P46779 uc_338.11-201ENST00000619132 160 ntBASIC0.53□□□□□ -2.32
RPL28P46779 SEPT14P19-203ENST00000633205 211 ntBASIC0.53□□□□□ -2.32
RPL28P46779 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.53□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms