Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MIR4778-201ENST00000577635 80 ntBASIC-0.47□□□□□ -2.48
SNCAP37840 MIR3192-201ENST00000584920 77 ntBASIC-0.47□□□□□ -2.48
SNCAP37840 AC097372.5-201ENST00000623665 376 ntBASIC-0.47□□□□□ -2.48
SNCAP37840 MIR6079-201ENST00000635807 62 ntBASIC-0.47□□□□□ -2.48
SNCAP37840 RNU1-76P-201ENST00000362903 159 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 SNORD83.1-201ENST00000411362 77 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 AL606489.2-201ENST00000433886 234 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 STAG3L5P-204ENST00000443759 179 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 MTCO2P7-201ENST00000446518 666 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.48□□□□□ -2.49
SNCAP37840 AC091874.1-201ENST00000511402 339 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 RNU6-583P-201ENST00000516012 92 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 RNU6-320P-201ENST00000516511 106 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 AP003049.1-201ENST00000529418 457 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.48□□□□□ -2.49
SNCAP37840 AC122134.1-202ENST00000569111 1201 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 AL022154.1-201ENST00000604698 785 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.48□□□□□ -2.49
SNCAP37840 AC138749.5-201ENST00000611461 208 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 AL157770.1-201ENST00000623049 439 ntBASIC-0.48□□□□□ -2.49
SNCAP37840 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 RNU6-744P-201ENST00000365557 107 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 MIR593-201ENST00000384856 100 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 RNU6-747P-201ENST00000390928 104 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 RNU6-241P-201ENST00000391148 104 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 RNA5SP201-201ENST00000410316 124 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.49□□□□□ -2.49
SNCAP37840 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.49□□□□□ -2.49
SNCAP37840 AL353777.1-201ENST00000425552 326 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.49□□□□□ -2.49
SNCAP37840 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.49□□□□□ -2.49
SNCAP37840 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.49□□□□□ -2.49
SNCAP37840 LINC01399-202ENST00000458450 244 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.49□□□□□ -2.49
SNCAP37840 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
SNCAP37840 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.49□□□□□ -2.49
SNCAP37840 MIR3146-201ENST00000580367 79 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 AL606834.3-201ENST00000602615 496 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 AC012507.3-201ENST00000603556 477 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 AC022217.4-201ENST00000604389 163 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.49□□□□□ -2.49
SNCAP37840 AP000943.4-201ENST00000622912 357 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 CDR1-202ENST00000625883 1485 ntBASIC-0.49□□□□□ -2.49
SNCAP37840 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
SNCAP37840 MIR610-201ENST00000385139 96 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 SNORA75.6-201ENST00000391318 127 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 MIR1185-1-201ENST00000408598 86 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 RNA5SP127-201ENST00000411051 133 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 RNU6-57P-201ENST00000411348 103 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 MTND4LP14-201ENST00000429447 288 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC093019.1-201ENST00000443135 252 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC007547.1-201ENST00000462177 490 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 HMGN1P10-201ENST00000474557 553 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC010469.2-201ENST00000496412 480 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC074133.1-201ENST00000515696 183 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.5□□□□□ -2.49
SNCAP37840 AC109446.1-201ENST00000566172 220 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 MIR3612-201ENST00000579753 87 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.5□□□□□ -2.49
SNCAP37840 AC110760.3-201ENST00000598794 467 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 RPL17P51-201ENST00000605218 238 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AP002360.4-201ENST00000606980 481 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC104073.3-201ENST00000610942 955 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 MIR8076-201ENST00000611401 83 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 AC007014.2-201ENST00000615581 479 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 MIR2909-201ENST00000617113 69 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 MIR8054-201ENST00000620877 86 ntBASIC-0.5□□□□□ -2.49
SNCAP37840 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.5□□□□□ -2.49
SNCAP37840 RNU6-369P-201ENST00000362515 102 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 MIR10A-201ENST00000385043 110 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 RNU6-679P-201ENST00000391003 106 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AC019070.1-201ENST00000415008 1024 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 HMGN2P26-201ENST00000463169 339 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.51□□□□□ -2.49
SNCAP37840 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AC234772.3-201ENST00000602277 528 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AC092447.9-201ENST00000603395 144 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 MTND3P19-201ENST00000603825 345 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 RNU4-5P-201ENST00000607255 135 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AC022893.3-201ENST00000607665 437 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AP000484.1-201ENST00000620067 1252 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AC067863.3-201ENST00000624172 122 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 SNORD98-201ENST00000636377 67 ntBASIC-0.51□□□□□ -2.49
SNCAP37840 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.52□□□□□ -2.49
SNCAP37840 PCNPP3-201ENST00000393579 471 ntBASIC-0.52□□□□□ -2.49
SNCAP37840 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
SNCAP37840 SNORD111-201ENST00000408139 94 ntBASIC-0.52□□□□□ -2.49
SNCAP37840 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.52□□□□□ -2.49
SNCAP37840 PDCL2P1-201ENST00000419302 352 ntBASIC-0.52□□□□□ -2.49
SNCAP37840 AC005534.2-201ENST00000431047 433 ntBASIC-0.52□□□□□ -2.49
SNCAP37840 SNORD4A-201ENST00000459174 72 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms