Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC005562.2-201ENST00000618264 111 ntBASIC2.2□□□□□ -2.06
HOXD13P35453 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HOXD13P35453 SNORA18.2-201ENST00000383865 132 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HOXD13P35453 MIR1283-2-201ENST00000408621 87 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 AL353689.1-201ENST00000438895 199 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 AL035666.1-201ENST00000446195 348 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 RPL23AP6-201ENST00000446637 472 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 RNU1-131P-201ENST00000458943 161 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 RNA5SP233-201ENST00000459153 113 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 AC087477.1-201ENST00000465747 340 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 AC010486.1-201ENST00000511793 424 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 RNU6-1198P-201ENST00000516904 67 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 RNA5SP454-201ENST00000517231 127 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 AC087441.2-201ENST00000529141 262 ntBASIC2.19□□□□□ -2.06
HOXD13P35453 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXD13P35453 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXD13P35453 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXD13P35453 RNA5SP276-201ENST00000362580 94 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 Y_RNA.86-201ENST00000363020 111 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 Y_RNA.132-201ENST00000363421 102 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 RNA5SP493-201ENST00000364115 91 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 RNU4-9P-201ENST00000364951 139 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 RNA5SP212-201ENST00000391223 107 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 MIR300-201ENST00000401138 83 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXD13P35453 AC096920.1-201ENST00000423991 241 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXD13P35453 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXD13P35453 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXD13P35453 RPL23AP75-201ENST00000491601 451 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 AF186996.7-201ENST00000492781 209 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXD13P35453 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXD13P35453 RNU2-44P-201ENST00000516795 194 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXD13P35453 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXD13P35453 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXD13P35453 MIR4648-201ENST00000580107 72 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 MIR4273-201ENST00000582824 84 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 AC092794.1-201ENST00000612734 582 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 TCL6_2.1-201ENST00000615162 119 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 SCARNA4-201ENST00000629045 128 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 MTND5P9-201ENST00000503854 1755 ntBASIC2.18□□□□□ -2.06
HOXD13P35453 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXD13P35453 SNRPEP8-201ENST00000442866 260 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXD13P35453 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXD13P35453 FGF7P6-202ENST00000451282 293 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 AC007395.1-201ENST00000451333 677 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 RPL23AP3-201ENST00000453844 468 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 PMCHL2-203ENST00000457791 237 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 TOMM22P6-201ENST00000465035 409 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 TRBV12-1-201ENST00000479785 344 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 RNU4-49P-201ENST00000516080 140 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 RNU6-566P-201ENST00000516790 107 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.17□□□□□ -2.06
HOXD13P35453 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXD13P35453 AC009248.2-201ENST00000619826 254 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 AL162373.1-201ENST00000620433 407 ntBASIC2.17□□□□□ -2.06
HOXD13P35453 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXD13P35453 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HOXD13P35453 MTND4P5-201ENST00000435821 1374 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 SNORD50.1-201ENST00000362987 71 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 Y_RNA.505-201ENST00000384489 102 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 MIR597-201ENST00000384968 97 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 U3.40-201ENST00000408706 208 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 Y_RNA.619-201ENST00000410951 90 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 RN7SKP192-201ENST00000411291 327 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXD13P35453 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HOXD13P35453 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXD13P35453 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXD13P35453 NFU1P2-201ENST00000448700 469 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 AC016925.1-201ENST00000458303 298 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 AC007215.1-201ENST00000464893 276 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 RNA5SP54-201ENST00000516951 92 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 MTND4LP26-201ENST00000518144 282 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXD13P35453 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXD13P35453 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXD13P35453 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 AC009318.2-201ENST00000610917 651 ntBASIC2.16□□□□□ -2.06
HOXD13P35453 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXD13P35453 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 Y_RNA.72-201ENST00000362894 103 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 U8.2-201ENST00000363156 134 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXD13P35453 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
HOXD13P35453 AL033519.2-201ENST00000403958 392 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 AL356379.1-201ENST00000414105 126 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXD13P35453 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXD13P35453 AC004386.2-201ENST00000441858 148 ntBASIC2.15□□□□□ -2.07
HOXD13P35453 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms