Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-1069P-201ENST00000516612 133 ntBASIC1.41□□□□□ -2.18
RORAP35398 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.41□□□□□ -2.18
RORAP35398 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.41□□□□□ -2.18
RORAP35398 AC104383.1-201ENST00000530297 370 ntBASIC1.41□□□□□ -2.18
RORAP35398 EIF4A1P12-201ENST00000551910 141 ntBASIC1.41□□□□□ -2.18
RORAP35398 AC021231.3-201ENST00000558497 370 ntBASIC1.41□□□□□ -2.18
RORAP35398 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.41□□□□□ -2.18
RORAP35398 CYP4A27P-201ENST00000567218 190 ntBASIC1.41□□□□□ -2.18
RORAP35398 AC010620.1-201ENST00000601088 1102 ntBASIC1.41□□□□□ -2.18
RORAP35398 AC139792.3-201ENST00000623525 224 ntBASIC1.41□□□□□ -2.18
RORAP35398 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
RORAP35398 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RORAP35398 MTND5P9-201ENST00000503854 1755 ntBASIC1.4□□□□□ -2.19
RORAP35398 RNU1-76P-201ENST00000362903 159 ntBASIC1.4□□□□□ -2.19
RORAP35398 Y_RNA.164-201ENST00000363709 102 ntBASIC1.4□□□□□ -2.19
RORAP35398 RNU6-438P-201ENST00000365561 103 ntBASIC1.4□□□□□ -2.19
RORAP35398 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.4□□□□□ -2.19
RORAP35398 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.4□□□□□ -2.19
RORAP35398 AC009474.2-201ENST00000451383 136 ntBASIC1.4□□□□□ -2.19
RORAP35398 RPL31P3-201ENST00000458430 332 ntBASIC1.4□□□□□ -2.19
RORAP35398 AC083798.1-201ENST00000472671 131 ntBASIC1.4□□□□□ -2.19
RORAP35398 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.4□□□□□ -2.19
RORAP35398 AC005840.1-201ENST00000498412 377 ntBASIC1.4□□□□□ -2.19
RORAP35398 RNU6-189P-201ENST00000516120 101 ntBASIC1.4□□□□□ -2.19
RORAP35398 SNORA31.17-201ENST00000516953 127 ntBASIC1.4□□□□□ -2.19
RORAP35398 RNU6-835P-201ENST00000516974 104 ntBASIC1.4□□□□□ -2.19
RORAP35398 RNU6-323P-201ENST00000521915 107 ntBASIC1.4□□□□□ -2.19
RORAP35398 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.4□□□□□ -2.19
RORAP35398 AL161670.1-201ENST00000554348 137 ntBASIC1.4□□□□□ -2.19
RORAP35398 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.4□□□□□ -2.19
RORAP35398 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.4□□□□□ -2.19
RORAP35398 MIR3611-201ENST00000584484 83 ntBASIC1.4□□□□□ -2.19
RORAP35398 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
RORAP35398 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.4□□□□□ -2.19
RORAP35398 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.4□□□□□ -2.19
RORAP35398 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RORAP35398 ZNF209P-201ENST00000593450 2304 ntBASIC1.39□□□□□ -2.19
RORAP35398 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.39□□□□□ -2.19
RORAP35398 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
RORAP35398 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
RORAP35398 SNORD116-9-201ENST00000384000 95 ntBASIC1.39□□□□□ -2.19
RORAP35398 SNORD116-3-201ENST00000384287 95 ntBASIC1.39□□□□□ -2.19
RORAP35398 SNORD116-7-201ENST00000384404 95 ntBASIC1.39□□□□□ -2.19
RORAP35398 SNORD116-5-201ENST00000384462 95 ntBASIC1.39□□□□□ -2.19
RORAP35398 RNU6-1106P-201ENST00000390845 107 ntBASIC1.39□□□□□ -2.19
RORAP35398 AC004965.1-201ENST00000413033 213 ntBASIC1.39□□□□□ -2.19
RORAP35398 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.39□□□□□ -2.19
RORAP35398 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
RORAP35398 AC092473.1-201ENST00000441098 221 ntBASIC1.39□□□□□ -2.19
RORAP35398 MTCO1P44-201ENST00000441935 243 ntBASIC1.39□□□□□ -2.19
RORAP35398 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.39□□□□□ -2.19
RORAP35398 AC016925.1-201ENST00000458303 298 ntBASIC1.39□□□□□ -2.19
RORAP35398 RNU6-261P-201ENST00000459506 102 ntBASIC1.39□□□□□ -2.19
RORAP35398 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.39□□□□□ -2.19
RORAP35398 AC025465.3-201ENST00000510570 311 ntBASIC1.39□□□□□ -2.19
RORAP35398 RNU6-612P-201ENST00000516909 102 ntBASIC1.39□□□□□ -2.19
RORAP35398 AP003034.1-201ENST00000534621 422 ntBASIC1.39□□□□□ -2.19
RORAP35398 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.39□□□□□ -2.19
RORAP35398 AL160236.1-201ENST00000556317 195 ntBASIC1.39□□□□□ -2.19
RORAP35398 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
RORAP35398 MIR4781-201ENST00000585250 76 ntBASIC1.39□□□□□ -2.19
RORAP35398 MIR5692C1-201ENST00000585309 91 ntBASIC1.39□□□□□ -2.19
RORAP35398 AC092747.3-201ENST00000603769 301 ntBASIC1.39□□□□□ -2.19
RORAP35398 AL121757.2-201ENST00000611223 313 ntBASIC1.39□□□□□ -2.19
RORAP35398 AC068205.3-201ENST00000636385 468 ntBASIC1.39□□□□□ -2.19
RORAP35398 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.39□□□□□ -2.19
RORAP35398 MTND5P26-201ENST00000426018 1752 ntBASIC1.39□□□□□ -2.19
RORAP35398 RNU6-82P-201ENST00000363970 107 ntBASIC1.38□□□□□ -2.19
RORAP35398 Y_RNA.238-201ENST00000364441 102 ntBASIC1.38□□□□□ -2.19
RORAP35398 SNORD116-1-201ENST00000384335 95 ntBASIC1.38□□□□□ -2.19
RORAP35398 RNU6-296P-201ENST00000384608 107 ntBASIC1.38□□□□□ -2.19
RORAP35398 RNU6-648P-201ENST00000410190 107 ntBASIC1.38□□□□□ -2.19
RORAP35398 RNU2-66P-201ENST00000410650 161 ntBASIC1.38□□□□□ -2.19
RORAP35398 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.38□□□□□ -2.19
RORAP35398 AC012306.1-201ENST00000423267 114 ntBASIC1.38□□□□□ -2.19
RORAP35398 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.38□□□□□ -2.19
RORAP35398 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.38□□□□□ -2.19
RORAP35398 AC098826.2-201ENST00000452011 651 ntBASIC1.38□□□□□ -2.19
RORAP35398 snoU13.6-201ENST00000458785 104 ntBASIC1.38□□□□□ -2.19
RORAP35398 RNU7-14P-201ENST00000459331 62 ntBASIC1.38□□□□□ -2.19
RORAP35398 AC010531.2-201ENST00000465012 153 ntBASIC1.38□□□□□ -2.19
RORAP35398 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
RORAP35398 AC097473.1-201ENST00000508142 408 ntBASIC1.38□□□□□ -2.19
RORAP35398 TRMT112P2-201ENST00000512910 132 ntBASIC1.38□□□□□ -2.19
RORAP35398 RNU5F-4P-201ENST00000516581 114 ntBASIC1.38□□□□□ -2.19
RORAP35398 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
RORAP35398 AC104576.1-201ENST00000524225 88 ntBASIC1.38□□□□□ -2.19
RORAP35398 CTHRC1P1-201ENST00000605383 469 ntBASIC1.38□□□□□ -2.19
RORAP35398 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.38□□□□□ -2.19
RORAP35398 AL136221.1-201ENST00000621449 509 ntBASIC1.38□□□□□ -2.19
RORAP35398 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.38□□□□□ -2.19
RORAP35398 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.37□□□□□ -2.19
RORAP35398 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
RORAP35398 RNY1P10-201ENST00000363268 113 ntBASIC1.37□□□□□ -2.19
RORAP35398 RNU6-112P-201ENST00000363599 104 ntBASIC1.37□□□□□ -2.19
RORAP35398 SNORD31B-201ENST00000364977 69 ntBASIC1.37□□□□□ -2.19
RORAP35398 SNORA69-201ENST00000383895 132 ntBASIC1.37□□□□□ -2.19
RORAP35398 MIR514A2-201ENST00000385131 88 ntBASIC1.37□□□□□ -2.19
RORAP35398 MIR514A3-201ENST00000385132 88 ntBASIC1.37□□□□□ -2.19
RORAP35398 MIR208B-201ENST00000401172 77 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms