Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC090515.1-201ENST00000465295 476 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 SNORA25.10-201ENST00000515926 124 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU6-976P-201ENST00000516086 111 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RNU6-991P-201ENST00000516168 107 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXC13P31276 MTND4P7-201ENST00000523876 130 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 MTCO3P23-201ENST00000561363 289 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 AC105137.2-201ENST00000569073 466 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC13P31276 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXC13P31276 BNIP3P16-201ENST00000589779 534 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC13P31276 AC006157.1-201ENST00000611750 366 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 FAM157A-202ENST00000615155 405 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 RMST_4.1-201ENST00000616886 107 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 uc_338.34-201ENST00000617467 174 ntBASIC2.49□□□□□ -2.01
HOXC13P31276 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC13P31276 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HOXC13P31276 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 Y_RNA.135-201ENST00000363439 95 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 RNU6-487P-201ENST00000365430 104 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 RNU6-1040P-201ENST00000383974 107 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 RNU6-601P-201ENST00000384540 107 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 Y_RNA.574-201ENST00000384766 95 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 RNU2-29P-201ENST00000410423 189 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 RNU6-847P-201ENST00000411115 108 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 RNU4-61P-201ENST00000411243 107 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.48□□□□□ -2.01
HOXC13P31276 AL139396.1-201ENST00000421137 167 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 CR769767.1-201ENST00000436337 346 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 SNRPFP3-201ENST00000457792 225 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 TBCAP3-201ENST00000512475 312 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 SNORA43.2-201ENST00000516652 128 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 RNA5SP137-201ENST00000516833 135 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 SNORA48.11-201ENST00000517015 89 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 AC109329.1-201ENST00000518744 317 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC13P31276 IMMP1LP2-201ENST00000552954 492 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC13P31276 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 MIR4703-201ENST00000577728 79 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 AC005357.1-201ENST00000588399 301 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 AL121917.1-203ENST00000605534 577 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 AL669831.3-213ENST00000636676 183 ntBASIC2.48□□□□□ -2.01
HOXC13P31276 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HOXC13P31276 RNU6-1115P-201ENST00000362490 106 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 RNU6-1010P-201ENST00000362757 107 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 SNORD113-7-201ENST00000363762 77 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 RNU6-715P-201ENST00000365204 103 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 U8.8-201ENST00000365399 135 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 Y_RNA.473-201ENST00000384333 102 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 Y_RNA.482-201ENST00000384377 111 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 RNU1-57P-201ENST00000384491 166 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 MIR95-201ENST00000385072 81 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC13P31276 EDDM3CP-201ENST00000415977 425 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC074117.2-201ENST00000417130 397 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 ARL5AP1-201ENST00000418991 388 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 DPH3P2-201ENST00000422618 250 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC018865.2-201ENST00000423631 129 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC13P31276 AC107032.1-201ENST00000485945 480 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC13P31276 MRPS35P2-201ENST00000508242 191 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC13P31276 RNU6-256P-201ENST00000516747 97 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC073410.2-201ENST00000603240 332 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC018889.1-201ENST00000605372 397 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC133104.2-201ENST00000615272 193 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 SDR42E1P4-201ENST00000620894 481 ntBASIC2.47□□□□□ -2.01
HOXC13P31276 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC13P31276 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
HOXC13P31276 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC13P31276 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HOXC13P31276 Y_RNA.153-201ENST00000363615 91 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 RNU6-99P-201ENST00000364721 107 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 Y_RNA.307-201ENST00000365022 117 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 RNU6-890P-201ENST00000384121 107 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 RNY1P14-201ENST00000384426 108 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 Y_RNA.512-201ENST00000384518 102 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 RNA5SP390-201ENST00000410191 113 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AL135786.1-201ENST00000415892 214 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.46□□□□□ -2.02
HOXC13P31276 PCNPP5-201ENST00000452246 481 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 RNA5SP233-201ENST00000459153 113 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AC104564.1-201ENST00000493028 407 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AC015911.1-201ENST00000495111 156 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 Y_RNA.654-201ENST00000497848 106 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AC108210.2-201ENST00000503681 201 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 MIR514B-201ENST00000516774 80 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 SNORA31.23-201ENST00000517219 133 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 SNORA31.25-201ENST00000517242 134 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 RNU2-19P-201ENST00000517288 84 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AC021269.2-201ENST00000532318 330 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.46□□□□□ -2.02
HOXC13P31276 AC026271.5-201ENST00000577873 130 ntBASIC2.46□□□□□ -2.02
HOXC13P31276 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.46□□□□□ -2.02
HOXC13P31276 AC092747.3-201ENST00000603769 301 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms