Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL138752.1-201ENST00000452964 351 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 AL133162.1-201ENST00000463228 453 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 AC140059.1-201ENST00000489238 361 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC12P31275 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC12P31275 SNORA27.4-201ENST00000516650 95 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC12P31275 AP002001.1-203ENST00000534002 267 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 AC004792.1-201ENST00000614523 137 ntBASIC3.33□□□□□ -1.88
HOXC12P31275 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC12P31275 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HOXC12P31275 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC12P31275 Y_RNA.122-201ENST00000363331 96 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 Y_RNA.275-201ENST00000364726 110 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 RNU2-61P-201ENST00000411069 191 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC12P31275 NDUFB4P10-201ENST00000452541 359 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 RPL31P41-201ENST00000477967 372 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 AC092185.1-201ENST00000491371 97 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC12P31275 MIR3922-201ENST00000585192 84 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 AC006380.1-201ENST00000603598 186 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXC12P31275 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 AC068205.3-201ENST00000636385 468 ntBASIC3.32□□□□□ -1.88
HOXC12P31275 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
HOXC12P31275 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC12P31275 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HOXC12P31275 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC12P31275 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC12P31275 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC12P31275 RNU6-486P-201ENST00000363116 107 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 RNU4-70P-201ENST00000384579 139 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 RNU2-54P-201ENST00000410299 190 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 RNA5SP306-201ENST00000411087 107 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 RNU6-1199P-201ENST00000411249 104 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 AC009963.1-201ENST00000417265 157 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC12P31275 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC12P31275 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 MIR3145-201ENST00000580727 82 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 MIR5187-201ENST00000583479 76 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 AL137849.1-201ENST00000604767 169 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 AC058791.1-201ENST00000608412 3198 ntBASIC3.31□□□□□ -1.88
HOXC12P31275 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC12P31275 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXC12P31275 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC12P31275 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXC12P31275 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC12P31275 UBE2WP1-201ENST00000362030 340 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 Y_RNA.292-201ENST00000364904 97 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 RNU6-1264P-201ENST00000383891 107 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 RNU6-662P-201ENST00000384253 104 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 RNU6-1289P-201ENST00000384431 106 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 MIR29B2-201ENST00000385055 81 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 RNA5SP424-201ENST00000390988 115 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 HMGN2P8-201ENST00000391458 268 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 Y_RNA.597-201ENST00000410463 100 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 Y_RNA.793-201ENST00000411222 111 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC12P31275 CYCSP35-201ENST00000451978 304 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 Y_RNA.644-201ENST00000459006 113 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC12P31275 RPS29P26-201ENST00000477483 171 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 RPS29P2-201ENST00000479278 136 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 Y_RNA.674-201ENST00000516362 113 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
HOXC12P31275 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXC12P31275 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXC12P31275 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC12P31275 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC12P31275 RNU4-80P-201ENST00000363200 141 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 RNA5SP504-201ENST00000410676 117 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 Y_RNA.626-201ENST00000411288 95 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC12P31275 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC12P31275 RN7SKP18-201ENST00000516005 275 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 SNORD116-28-201ENST00000516123 91 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC12P31275 AC090877.1-201ENST00000561418 344 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXC12P31275 AC107294.3-201ENST00000609211 526 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXC12P31275 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.29□□□□□ -1.88
HOXC12P31275 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXC12P31275 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
HOXC12P31275 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC12P31275 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms