Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.49□□□□□ -2.49
CLIP1P30622 RPL39P6-201ENST00000448289 150 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 AL122001.1-201ENST00000457027 370 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.49□□□□□ -2.49
CLIP1P30622 SNORD4A-201ENST00000459174 72 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 MTND2P33-201ENST00000506452 1031 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
CLIP1P30622 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.49□□□□□ -2.49
CLIP1P30622 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.49□□□□□ -2.49
CLIP1P30622 AC021231.3-201ENST00000558497 370 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 AL390123.1-201ENST00000603216 237 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 AC092447.9-201ENST00000603395 144 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 SEPT14P17-201ENST00000617978 177 ntBASIC-0.49□□□□□ -2.49
CLIP1P30622 SNORD116-20-201ENST00000384529 92 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
CLIP1P30622 RNA5SP390-201ENST00000410191 113 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 RNU6-994P-201ENST00000410507 111 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.5□□□□□ -2.49
CLIP1P30622 HMGN2P26-201ENST00000463169 339 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 AC074133.1-201ENST00000515696 183 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 SCARNA8-201ENST00000515924 131 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 MIR4300-201ENST00000581016 96 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 AC004223.2-201ENST00000590309 544 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 AC234772.3-201ENST00000602277 528 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 AL034555.1-201ENST00000604816 211 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.5□□□□□ -2.49
CLIP1P30622 MIR6079-201ENST00000635807 62 ntBASIC-0.5□□□□□ -2.49
CLIP1P30622 SNORA9.1-201ENST00000362412 131 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 RNU6-223P-201ENST00000362830 107 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 RNU6-674P-201ENST00000363831 107 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 PCNPP3-201ENST00000393579 471 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 MTCO2P5-201ENST00000422621 426 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.51□□□□□ -2.49
CLIP1P30622 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.51□□□□□ -2.49
CLIP1P30622 SNORA31.3-201ENST00000516029 96 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 RN7SKP287-201ENST00000516546 266 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.51□□□□□ -2.49
CLIP1P30622 AC023538.1-201ENST00000534576 736 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 AC092325.1-201ENST00000566449 554 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 AC122134.1-202ENST00000569111 1201 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 AC005176.2-201ENST00000596933 147 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 AL354696.1-201ENST00000614652 497 ntBASIC-0.51□□□□□ -2.49
CLIP1P30622 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.52□□□□□ -2.49
CLIP1P30622 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
CLIP1P30622 RNU4-15P-201ENST00000362613 141 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 RNU6-839P-201ENST00000363347 108 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 RNY4P16-201ENST00000364768 94 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.52□□□□□ -2.49
CLIP1P30622 SNORA32.3-201ENST00000384772 121 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 SNORA12.1-201ENST00000390873 148 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 RNA5SP323-201ENST00000391094 133 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 SNORA75.6-201ENST00000391318 127 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
CLIP1P30622 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
CLIP1P30622 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
CLIP1P30622 MTND1P21-201ENST00000412991 285 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.52□□□□□ -2.49
CLIP1P30622 snoU109.2-201ENST00000459316 135 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 AC022868.1-201ENST00000517767 391 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.52□□□□□ -2.49
CLIP1P30622 MIR3612-201ENST00000579753 87 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 MIR4723-201ENST00000585070 81 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 AC090617.9-201ENST00000623751 147 ntBASIC-0.52□□□□□ -2.49
CLIP1P30622 RNU6-199P-201ENST00000362954 107 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 RNA5SP275-201ENST00000363936 118 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 RNU6-359P-201ENST00000365466 108 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 MIR635-201ENST00000384830 98 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 MIR660-201ENST00000385235 97 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 RNU6-57P-201ENST00000411348 103 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 TIMM9P3-201ENST00000428659 274 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.53□□□□□ -2.49
CLIP1P30622 MRPL42P4-201ENST00000453267 443 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.53□□□□□ -2.49
CLIP1P30622 AC025465.4-201ENST00000513422 638 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 AC115989.2-201ENST00000578640 563 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.53□□□□□ -2.49
CLIP1P30622 MIR8064-201ENST00000612863 90 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 AC007014.2-201ENST00000615581 479 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 AL513423.1-201ENST00000621695 132 ntBASIC-0.53□□□□□ -2.49
CLIP1P30622 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.53□□□□□ -2.49
CLIP1P30622 SNORA1.1-201ENST00000364671 133 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 SNORA72.2-201ENST00000365028 127 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 RNU6-673P-201ENST00000365084 104 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 MIR106A-201ENST00000384870 81 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 RNU6-127P-201ENST00000390897 107 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 MIR548H2-201ENST00000408874 88 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.54□□□□□ -2.5
CLIP1P30622 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.54□□□□□ -2.5
CLIP1P30622 AL353997.1-201ENST00000432936 108 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 STAG3L5P-204ENST00000443759 179 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 MTND4P19-201ENST00000446659 478 ntBASIC-0.54□□□□□ -2.5
CLIP1P30622 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.54□□□□□ -2.5
CLIP1P30622 RNU6-143P-201ENST00000516942 93 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms