Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC073648.5-201ENST00000603502 305 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 AL356157.2-201ENST00000605122 111 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 CTHRC1P1-201ENST00000605383 469 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 AL121757.2-201ENST00000611223 313 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 AC008147.4-201ENST00000617570 1204 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 AC068792.1-201ENST00000621354 417 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 AL691447.3-201ENST00000635020 330 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DMAP28067 ELL2P3-201ENST00000457883 1602 ntBASIC1.07□□□□□ -2.24
HLA-DMAP28067 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HLA-DMAP28067 SNORD31B-201ENST00000364977 69 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU4-20P-201ENST00000365601 151 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 SNORA18.2-201ENST00000383865 132 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU6-38P-201ENST00000384085 107 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU5A-6P-201ENST00000384136 116 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU6-360P-201ENST00000390944 104 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU6-1093P-201ENST00000391194 107 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 MIR208B-201ENST00000401172 77 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 MIR1261-201ENST00000408659 82 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 CDK8P2-201ENST00000415020 547 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RPL21P111-201ENST00000418453 477 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 MTND3P9-201ENST00000429526 346 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 MTCO2P18-201ENST00000457151 658 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 snoU13.30-201ENST00000458951 104 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 SNORD13-201ENST00000459299 104 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 snoU13.15-201ENST00000459407 104 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU7-138P-201ENST00000459479 64 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU6-261P-201ENST00000459506 102 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RPL9P9-202ENST00000466501 579 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RPS3AP17-201ENST00000472594 777 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 HMGN2P9-201ENST00000476875 229 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU6-612P-201ENST00000516909 102 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 RNU6-548P-201ENST00000517083 115 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC069113.1-201ENST00000517763 267 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC004223.2-201ENST00000590309 544 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC005520.5-201ENST00000613926 164 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 AL078604.3-201ENST00000615580 211 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 MIR8063-201ENST00000621930 81 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 MIR3974-201ENST00000637126 96 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
HLA-DMAP28067 AC009541.1-201ENST00000438279 2662 ntBASIC1.06□□□□□ -2.24
HLA-DMAP28067 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
HLA-DMAP28067 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HLA-DMAP28067 RNU1-76P-201ENST00000362903 159 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 Y_RNA.167-201ENST00000363735 109 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 RNU4-56P-201ENST00000364700 142 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 SNORA29-201ENST00000384183 140 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 MIR487A-201ENST00000385009 80 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 MIR548B-201ENST00000385247 97 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 EBAG9P1-201ENST00000418955 543 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 CYCSP49-201ENST00000420810 319 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC090960.1-201ENST00000421072 306 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HLA-DMAP28067 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC245047.4-201ENST00000433189 144 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC016925.1-201ENST00000458303 298 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 SRRM1P2-201ENST00000464531 1192 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC091133.4-201ENST00000511142 308 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 SNORA40.12-201ENST00000516329 111 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 RNA5SP437-201ENST00000517249 129 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC025423.5-201ENST00000550230 219 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 MIR3945-201ENST00000581853 98 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 RMST_3.1-201ENST00000611651 109 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC083806.3-201ENST00000614016 455 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AC090582.1-201ENST00000636321 199 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 AL159152.1-201ENST00000635019 2587 ntBASIC1.05□□□□□ -2.24
HLA-DMAP28067 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DMAP28067 RNU6-1317P-201ENST00000364582 104 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 Y_RNA.296-201ENST00000364930 108 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 RNU6-877P-201ENST00000383868 107 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AF228730.1-201ENST00000397972 663 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC004866.1-201ENST00000411748 78 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DMAP28067 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AC060773.1-201ENST00000421698 310 ntBASIC1.04□□□□□ -2.24
HLA-DMAP28067 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms