Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SNORA20.2-201ENST00000383922 131 ntBASIC0.52□□□□□ -2.33
CCL1P22362 RNU6-906P-201ENST00000384700 70 ntBASIC0.52□□□□□ -2.33
CCL1P22362 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.52□□□□□ -2.33
CCL1P22362 RN7SKP200-201ENST00000410564 320 ntBASIC0.52□□□□□ -2.33
CCL1P22362 RPS3AP1-201ENST00000413190 320 ntBASIC0.52□□□□□ -2.33
CCL1P22362 HMGN2P34-201ENST00000437647 269 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AC245047.7-201ENST00000440265 293 ntBASIC0.52□□□□□ -2.33
CCL1P22362 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.52□□□□□ -2.33
CCL1P22362 AC010486.2-201ENST00000505572 483 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AK3P2-201ENST00000507976 429 ntBASIC0.52□□□□□ -2.33
CCL1P22362 MTCO3P7-201ENST00000510008 774 ntBASIC0.52□□□□□ -2.33
CCL1P22362 LRRC34P2-201ENST00000514850 553 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.52□□□□□ -2.33
CCL1P22362 DEFB108E-201ENST00000524692 240 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AL590705.4-201ENST00000532209 134 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AC109446.2-201ENST00000567872 497 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AL391840.1-201ENST00000571144 367 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AP001836.1-201ENST00000604675 523 ntBASIC0.52□□□□□ -2.33
CCL1P22362 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.52□□□□□ -2.33
CCL1P22362 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.52□□□□□ -2.33
CCL1P22362 AC006927.3-201ENST00000638789 384 ntBASIC0.52□□□□□ -2.33
CCL1P22362 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CCL1P22362 RNU5F-6P-201ENST00000362979 116 ntBASIC0.51□□□□□ -2.33
CCL1P22362 Y_RNA.124-201ENST00000363339 93 ntBASIC0.51□□□□□ -2.33
CCL1P22362 RNU6-975P-201ENST00000384296 105 ntBASIC0.51□□□□□ -2.33
CCL1P22362 SNORA80D-201ENST00000384488 135 ntBASIC0.51□□□□□ -2.33
CCL1P22362 RNU6-110P-201ENST00000384508 104 ntBASIC0.51□□□□□ -2.33
CCL1P22362 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
CCL1P22362 RNA5SP323-201ENST00000391094 133 ntBASIC0.51□□□□□ -2.33
CCL1P22362 RNU6-1093P-201ENST00000391194 107 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AL365184.2-201ENST00000431139 435 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.51□□□□□ -2.33
CCL1P22362 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.51□□□□□ -2.33
CCL1P22362 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.51□□□□□ -2.33
CCL1P22362 AC048334.1-201ENST00000477975 159 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AC004812.1-201ENST00000540773 146 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AC016256.1-201ENST00000547971 354 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.51□□□□□ -2.33
CCL1P22362 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.51□□□□□ -2.33
CCL1P22362 AC026470.2-201ENST00000561492 181 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.51□□□□□ -2.33
CCL1P22362 AC022432.1-201ENST00000595739 310 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AC018714.1-201ENST00000605028 208 ntBASIC0.51□□□□□ -2.33
CCL1P22362 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.51□□□□□ -2.33
CCL1P22362 AL359757.2-201ENST00000624309 274 ntBASIC0.51□□□□□ -2.33
CCL1P22362 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CCL1P22362 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
CCL1P22362 MIR1253-201ENST00000408273 105 ntBASIC0.5□□□□□ -2.33
CCL1P22362 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.5□□□□□ -2.33
CCL1P22362 MTCO2P23-201ENST00000425216 680 ntBASIC0.5□□□□□ -2.33
CCL1P22362 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.5□□□□□ -2.33
CCL1P22362 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.5□□□□□ -2.33
CCL1P22362 AC105758.1-201ENST00000506038 399 ntBASIC0.5□□□□□ -2.33
CCL1P22362 RNU6-1053P-201ENST00000515930 101 ntBASIC0.5□□□□□ -2.33
CCL1P22362 SCARNA24.1-201ENST00000516465 137 ntBASIC0.5□□□□□ -2.33
CCL1P22362 AC022878.1-201ENST00000530684 149 ntBASIC0.5□□□□□ -2.33
CCL1P22362 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
CCL1P22362 TPRKBP2-201ENST00000565969 475 ntBASIC0.5□□□□□ -2.33
CCL1P22362 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.5□□□□□ -2.33
CCL1P22362 AL158050.2-201ENST00000605336 568 ntBASIC0.5□□□□□ -2.33
CCL1P22362 uc_338.11-201ENST00000619132 160 ntBASIC0.5□□□□□ -2.33
CCL1P22362 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.5□□□□□ -2.33
CCL1P22362 AL513423.1-201ENST00000621695 132 ntBASIC0.5□□□□□ -2.33
CCL1P22362 AC011155.2-201ENST00000623202 216 ntBASIC0.5□□□□□ -2.33
CCL1P22362 SNORD3E-202ENST00000627253 216 ntBASIC0.5□□□□□ -2.33
CCL1P22362 RNA5SP109-201ENST00000391010 116 ntBASIC0.49□□□□□ -2.33
CCL1P22362 MIR942-201ENST00000401111 86 ntBASIC0.49□□□□□ -2.33
CCL1P22362 RNU6-733P-201ENST00000410759 104 ntBASIC0.49□□□□□ -2.33
CCL1P22362 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.49□□□□□ -2.33
CCL1P22362 AL031274.1-201ENST00000450334 232 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AL162395.1-201ENST00000457882 422 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC092991.1-201ENST00000477176 376 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC079382.1-201ENST00000493346 557 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.49□□□□□ -2.33
CCL1P22362 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC007834.2-201ENST00000536310 343 ntBASIC0.49□□□□□ -2.33
CCL1P22362 APOOP3-201ENST00000536787 586 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.49□□□□□ -2.33
CCL1P22362 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.49□□□□□ -2.33
CCL1P22362 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.49□□□□□ -2.33
CCL1P22362 MIR3941-201ENST00000582572 103 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC104458.1-201ENST00000608243 463 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC009159.2-201ENST00000617603 606 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC005562.2-201ENST00000618264 111 ntBASIC0.49□□□□□ -2.33
CCL1P22362 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.49□□□□□ -2.33
CCL1P22362 AC022418.1-201ENST00000624118 445 ntBASIC0.49□□□□□ -2.33
CCL1P22362 SNORA43.4-201ENST00000629559 138 ntBASIC0.49□□□□□ -2.33
CCL1P22362 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
CCL1P22362 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCL1P22362 SNORA33-201ENST00000363664 130 ntBASIC0.48□□□□□ -2.33
CCL1P22362 Y_RNA.338-201ENST00000365320 114 ntBASIC0.48□□□□□ -2.33
CCL1P22362 RNU6-169P-201ENST00000365336 107 ntBASIC0.48□□□□□ -2.33
CCL1P22362 RNU6-434P-201ENST00000384376 107 ntBASIC0.48□□□□□ -2.33
CCL1P22362 RNU6-417P-201ENST00000384712 107 ntBASIC0.48□□□□□ -2.33
CCL1P22362 RNU4-46P-201ENST00000410818 138 ntBASIC0.48□□□□□ -2.33
CCL1P22362 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.48□□□□□ -2.33
CCL1P22362 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.48□□□□□ -2.33
CCL1P22362 AC079781.2-201ENST00000446424 169 ntBASIC0.48□□□□□ -2.33
CCL1P22362 RAP1BP2-201ENST00000478270 544 ntBASIC0.48□□□□□ -2.33
CCL1P22362 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms