Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNA5SP293-201ENST00000410527 113 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 RN7SKP220-201ENST00000410611 288 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC3P19447 AC096920.1-201ENST00000423991 241 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 ARL5AP4-201ENST00000430731 512 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 MICF-203ENST00000432679 129 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 AC007395.1-201ENST00000451333 677 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 TRBVB-201ENST00000477100 408 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 CYCSP23-201ENST00000519781 313 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC3P19447 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.88□□□□□ -1.79
ERCC3P19447 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.88□□□□□ -1.79
ERCC3P19447 SNORD11B-201ENST00000607707 90 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 SCARNA15.3-201ENST00000626315 122 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 SCARNA4.1-201ENST00000628597 123 ntBASIC3.88□□□□□ -1.79
ERCC3P19447 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC3P19447 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERCC3P19447 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.87□□□□□ -1.79
ERCC3P19447 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERCC3P19447 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERCC3P19447 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERCC3P19447 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.87□□□□□ -1.79
ERCC3P19447 SNORD113-8-201ENST00000363497 74 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 Y_RNA.483-201ENST00000384380 101 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 RNU6-21P-201ENST00000384710 107 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 MIR215-201ENST00000384858 110 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.87□□□□□ -1.79
ERCC3P19447 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.87□□□□□ -1.79
ERCC3P19447 RNU6-965P-201ENST00000516721 96 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 RNU6-56P-201ENST00000516986 93 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 AP006245.1-201ENST00000522549 120 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 DEFB131C-201ENST00000528817 165 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.87□□□□□ -1.79
ERCC3P19447 AC018448.1-201ENST00000552843 316 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 AC110588.1-201ENST00000559699 137 ntBASIC3.87□□□□□ -1.79
ERCC3P19447 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.87□□□□□ -1.79
ERCC3P19447 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.86□□□□□ -1.79
ERCC3P19447 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.86□□□□□ -1.79
ERCC3P19447 AC068647.1-201ENST00000489539 2265 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ERCC3P19447 RNU1-72P-201ENST00000362976 153 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 SNORD87-201ENST00000364849 89 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 RNU6-1026P-201ENST00000384465 108 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 Y_RNA.618-201ENST00000410949 107 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.86□□□□□ -1.79
ERCC3P19447 AC006989.1-201ENST00000427212 131 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 AC005002.2-201ENST00000438228 269 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.86□□□□□ -1.79
ERCC3P19447 AC009237.7-201ENST00000447357 229 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 AC083906.5-201ENST00000503722 328 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.86□□□□□ -1.79
ERCC3P19447 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.86□□□□□ -1.79
ERCC3P19447 AC026333.2-201ENST00000542164 106 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
ERCC3P19447 MIR3117-201ENST00000584034 78 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 AC005176.2-201ENST00000596933 147 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 AC011373.1-201ENST00000607270 237 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.86□□□□□ -1.79
ERCC3P19447 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ERCC3P19447 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ERCC3P19447 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.86□□□□□ -1.79
ERCC3P19447 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERCC3P19447 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC3P19447 MT-TW-201ENST00000387382 68 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 SNORD115-46-201ENST00000390982 71 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 RNU4-30P-201ENST00000410245 143 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 AC004866.1-201ENST00000411748 78 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC3P19447 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC3P19447 Z96811.1-201ENST00000445880 108 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC3P19447 CYP2C59P-201ENST00000457790 269 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 RNU7-14P-201ENST00000459331 62 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 S100A11P2-201ENST00000467589 312 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 AC117440.1-201ENST00000474107 571 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 NDUFB9P3-201ENST00000521269 501 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC3P19447 TGIF1P1-201ENST00000558095 802 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 AC022149.2-201ENST00000621061 203 ntBASIC3.85□□□□□ -1.79
ERCC3P19447 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC3P19447 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.84□□□□□ -1.79
ERCC3P19447 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ERCC3P19447 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
ERCC3P19447 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ERCC3P19447 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC3P19447 Y_RNA.188-201ENST00000363952 111 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 RNU6-743P-201ENST00000364151 106 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 RNA5SP475-201ENST00000410568 110 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 RNU2-63P-201ENST00000410792 194 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 RNU5A-5P-201ENST00000411054 116 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 AL161788.1-201ENST00000441805 169 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 RNU6-1098P-201ENST00000516772 96 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 RNU6-1271P-201ENST00000517049 105 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.84□□□□□ -1.79
ERCC3P19447 MIR3671-201ENST00000580455 88 ntBASIC3.84□□□□□ -1.79
ERCC3P19447 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC3P19447 AC062037.2-201ENST00000610137 73 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms