Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 Y_RNA.436-201ENST00000384097 102 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 SNORA36A-201ENST00000384221 132 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 MIR597-201ENST00000384968 97 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
XRCC1P18887 MIR450B-201ENST00000401182 78 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 RNU2-41P-201ENST00000410991 178 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 SNRPEP10-201ENST00000420249 274 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 MTCO1P20-201ENST00000425366 358 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 NDUFA5P4-201ENST00000436704 385 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 MTCO2P7-201ENST00000446518 666 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.63□□□□□ -2.15
XRCC1P18887 TRBVA-201ENST00000498804 316 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 RNU5F-4P-201ENST00000516581 114 ntBASIC1.63□□□□□ -2.15
XRCC1P18887 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.63□□□□□ -2.15
XRCC1P18887 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.63□□□□□ -2.15
XRCC1P18887 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
XRCC1P18887 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
XRCC1P18887 RNU1-76P-201ENST00000362903 159 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 RNU6-1317P-201ENST00000364582 104 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 SNORD31B-201ENST00000364977 69 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 Y_RNA.372-201ENST00000365599 102 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC1P18887 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
XRCC1P18887 SNORA48.1-201ENST00000390879 135 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AL590002.1-201ENST00000406554 418 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 RNA5SP501-201ENST00000410990 112 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 RPS26P42-201ENST00000413485 326 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 MTND3P9-201ENST00000429526 346 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC1P18887 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC1P18887 RPS23P5-201ENST00000495419 428 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 RPL39P5-202ENST00000512505 151 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 RNU6-314P-201ENST00000516574 104 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 RNU6-1332P-201ENST00000516666 104 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 Y_RNA.704-201ENST00000516851 102 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.62□□□□□ -2.15
XRCC1P18887 CBX3P4-201ENST00000538909 354 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AC026371.1-201ENST00000551867 419 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.62□□□□□ -2.15
XRCC1P18887 CPDP1-201ENST00000579660 283 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 FGF7P1-201ENST00000582820 288 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AC005786.1-201ENST00000588553 154 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AC010525.2-201ENST00000590920 195 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 MIR8076-201ENST00000611401 83 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AL359697.1-201ENST00000624879 587 ntBASIC1.62□□□□□ -2.15
XRCC1P18887 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.62□□□□□ -2.15
XRCC1P18887 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
XRCC1P18887 RNU6-254P-201ENST00000363377 107 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 SNORD113-7-201ENST00000363762 77 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 RNY3P3-201ENST00000363816 102 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 RNU4-42P-201ENST00000364738 142 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 RNU6-1286P-201ENST00000383871 107 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 SNORA32.2-201ENST00000384049 122 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 SNORA29-201ENST00000384183 140 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 RNU6-933P-201ENST00000384424 107 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 RNU6-1093P-201ENST00000391194 107 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 DLGAP5P1-201ENST00000430307 464 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.61□□□□□ -2.15
XRCC1P18887 AMD1P1-201ENST00000457220 922 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 RNU7-14P-201ENST00000459331 62 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.61□□□□□ -2.15
XRCC1P18887 AC083904.1-201ENST00000487828 231 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
XRCC1P18887 ZNF519P2-201ENST00000557032 169 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 AC090517.1-201ENST00000569307 266 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 MIR3169-201ENST00000578032 83 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 MIR4713-201ENST00000582691 75 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 AP000942.3-201ENST00000603702 160 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 FAM157A-202ENST00000615155 405 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.61□□□□□ -2.15
XRCC1P18887 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.61□□□□□ -2.15
XRCC1P18887 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
XRCC1P18887 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
XRCC1P18887 RNU6-562P-201ENST00000362731 107 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 RNU5B-2P-201ENST00000363036 113 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 Y_RNA.530-201ENST00000384587 101 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 RNU6-780P-201ENST00000391030 104 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 RNU6-325P-201ENST00000411132 105 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AC009310.1-201ENST00000414414 451 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AC016907.1-201ENST00000419483 435 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.6□□□□□ -2.15
XRCC1P18887 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.6□□□□□ -2.15
XRCC1P18887 TOMM22P6-201ENST00000465035 409 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.6□□□□□ -2.15
XRCC1P18887 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.6□□□□□ -2.15
XRCC1P18887 ATP5EP1-201ENST00000510257 156 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 RNU6-1098P-201ENST00000516772 96 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AC109635.3-201ENST00000529536 185 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.6□□□□□ -2.15
XRCC1P18887 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
XRCC1P18887 AC026470.2-201ENST00000561492 181 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AC022254.1-201ENST00000567857 235 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AL590240.4-201ENST00000616908 390 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AC137590.2-201ENST00000619709 240 ntBASIC1.6□□□□□ -2.15
XRCC1P18887 AC006026.1-201ENST00000444025 1803 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms