Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC093578.1-201ENST00000415219 368 ntBASIC3.95□□□□□ -1.78
LIG1P18858 AC024067.1-201ENST00000426199 223 ntBASIC3.95□□□□□ -1.78
LIG1P18858 AL358232.1-201ENST00000448030 501 ntBASIC3.95□□□□□ -1.78
LIG1P18858 RPS29P12-201ENST00000460178 152 ntBASIC3.95□□□□□ -1.78
LIG1P18858 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.95□□□□□ -1.78
LIG1P18858 RPS29P20-201ENST00000489592 171 ntBASIC3.95□□□□□ -1.78
LIG1P18858 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.95□□□□□ -1.78
LIG1P18858 RNU5F-8P-201ENST00000515941 111 ntBASIC3.95□□□□□ -1.78
LIG1P18858 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.95□□□□□ -1.78
LIG1P18858 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.95□□□□□ -1.78
LIG1P18858 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.95□□□□□ -1.78
LIG1P18858 snoU18.1-201ENST00000629629 71 ntBASIC3.95□□□□□ -1.78
LIG1P18858 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIG1P18858 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LIG1P18858 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
LIG1P18858 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIG1P18858 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.94□□□□□ -1.78
LIG1P18858 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
LIG1P18858 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIG1P18858 AC092593.1-201ENST00000515413 1815 ntBASIC3.94□□□□□ -1.78
LIG1P18858 RNU6-1310P-201ENST00000384153 107 ntBASIC3.94□□□□□ -1.78
LIG1P18858 RNU6-793P-201ENST00000384233 104 ntBASIC3.94□□□□□ -1.78
LIG1P18858 Y_RNA.498-201ENST00000384460 102 ntBASIC3.94□□□□□ -1.78
LIG1P18858 ELOCP21-201ENST00000412558 336 ntBASIC3.94□□□□□ -1.78
LIG1P18858 RAB28P5-201ENST00000427490 651 ntBASIC3.94□□□□□ -1.78
LIG1P18858 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.94□□□□□ -1.78
LIG1P18858 RPS27P29-201ENST00000463110 252 ntBASIC3.94□□□□□ -1.78
LIG1P18858 RPL30P12-201ENST00000474666 353 ntBASIC3.94□□□□□ -1.78
LIG1P18858 AC025518.1-201ENST00000479856 347 ntBASIC3.94□□□□□ -1.78
LIG1P18858 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.94□□□□□ -1.78
LIG1P18858 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.94□□□□□ -1.78
LIG1P18858 AC006445.2-201ENST00000510061 472 ntBASIC3.94□□□□□ -1.78
LIG1P18858 RN7SKP282-201ENST00000516824 299 ntBASIC3.94□□□□□ -1.78
LIG1P18858 AC115990.1-201ENST00000526957 301 ntBASIC3.94□□□□□ -1.78
LIG1P18858 MIR4444-1-201ENST00000581696 74 ntBASIC3.94□□□□□ -1.78
LIG1P18858 MIR4444-2-201ENST00000584390 74 ntBASIC3.94□□□□□ -1.78
LIG1P18858 AC024220.1-201ENST00000603675 484 ntBASIC3.94□□□□□ -1.78
LIG1P18858 AC004467.1-201ENST00000615678 330 ntBASIC3.94□□□□□ -1.78
LIG1P18858 AC012314.7-201ENST00000619693 93 ntBASIC3.94□□□□□ -1.78
LIG1P18858 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIG1P18858 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIG1P18858 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIG1P18858 AC099654.7-201ENST00000635788 2127 ntBASIC3.94□□□□□ -1.78
LIG1P18858 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIG1P18858 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIG1P18858 RNU1-75P-201ENST00000347264 129 ntBASIC3.93□□□□□ -1.78
LIG1P18858 RNU4-80P-201ENST00000363200 141 ntBASIC3.93□□□□□ -1.78
LIG1P18858 RNU6-270P-201ENST00000364131 105 ntBASIC3.93□□□□□ -1.78
LIG1P18858 MIR449B-201ENST00000384995 97 ntBASIC3.93□□□□□ -1.78
LIG1P18858 AL357139.1-201ENST00000407792 426 ntBASIC3.93□□□□□ -1.78
LIG1P18858 RNU6-1199P-201ENST00000411249 104 ntBASIC3.93□□□□□ -1.78
LIG1P18858 RPL23AP82-202ENST00000427528 469 ntBASIC3.93□□□□□ -1.78
LIG1P18858 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.93□□□□□ -1.78
LIG1P18858 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.93□□□□□ -1.78
LIG1P18858 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.93□□□□□ -1.78
LIG1P18858 CENPBD1P1-201ENST00000464061 469 ntBASIC3.93□□□□□ -1.78
LIG1P18858 SNORA31.16-201ENST00000516773 139 ntBASIC3.93□□□□□ -1.78
LIG1P18858 RNU6-928P-201ENST00000516876 104 ntBASIC3.93□□□□□ -1.78
LIG1P18858 HSPE1P7-201ENST00000604681 321 ntBASIC3.93□□□□□ -1.78
LIG1P18858 AP003355.3-201ENST00000623465 114 ntBASIC3.93□□□□□ -1.78
LIG1P18858 MTND1P7-201ENST00000632801 297 ntBASIC3.93□□□□□ -1.78
LIG1P18858 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.93□□□□□ -1.78
LIG1P18858 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIG1P18858 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LIG1P18858 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIG1P18858 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.93□□□□□ -1.78
LIG1P18858 PWAR6-201ENST00000552334 4618 ntBASIC3.93□□□□□ -1.78
LIG1P18858 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LIG1P18858 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.92□□□□□ -1.78
LIG1P18858 FAM35CP-201ENST00000554755 2470 ntBASIC3.92□□□□□ -1.78
LIG1P18858 RNU4-56P-201ENST00000364700 142 ntBASIC3.92□□□□□ -1.78
LIG1P18858 SNORA40.19-201ENST00000390846 128 ntBASIC3.92□□□□□ -1.78
LIG1P18858 RNU6-1248P-201ENST00000391096 64 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AC099548.1-201ENST00000421443 426 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AC019205.3-201ENST00000424573 156 ntBASIC3.92□□□□□ -1.78
LIG1P18858 PRSS3P4-201ENST00000453323 162 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AL121594.1-201ENST00000475906 575 ntBASIC3.92□□□□□ -1.78
LIG1P18858 ACA59.2-201ENST00000517061 156 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AC104027.1-201ENST00000521887 300 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.92□□□□□ -1.78
LIG1P18858 AP000867.2-201ENST00000532468 320 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.92□□□□□ -1.78
LIG1P18858 MIR3136-201ENST00000583498 78 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.92□□□□□ -1.78
LIG1P18858 AC008739.3-201ENST00000603262 127 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AC005520.5-201ENST00000613926 164 ntBASIC3.92□□□□□ -1.78
LIG1P18858 MIR6075-201ENST00000620782 95 ntBASIC3.92□□□□□ -1.78
LIG1P18858 RBBP8P1-201ENST00000449447 1844 ntBASIC3.92□□□□□ -1.78
LIG1P18858 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIG1P18858 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIG1P18858 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIG1P18858 RNA5SP139-201ENST00000364340 117 ntBASIC3.91□□□□□ -1.78
LIG1P18858 Y_RNA.272-201ENST00000364696 102 ntBASIC3.91□□□□□ -1.78
LIG1P18858 Y_RNA.571-201ENST00000384753 98 ntBASIC3.91□□□□□ -1.78
LIG1P18858 AL512633.1-201ENST00000399931 655 ntBASIC3.91□□□□□ -1.78
LIG1P18858 RNU2-54P-201ENST00000410299 190 ntBASIC3.91□□□□□ -1.78
LIG1P18858 RNU5E-9P-201ENST00000411164 104 ntBASIC3.91□□□□□ -1.78
LIG1P18858 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.91□□□□□ -1.78
LIG1P18858 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.91□□□□□ -1.78
LIG1P18858 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms