Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ATF4P18848 SNORD56.5-201ENST00000364281 72 ntBASIC3.27□□□□□ -1.89
ATF4P18848 Y_RNA.243-201ENST00000364481 109 ntBASIC3.27□□□□□ -1.89
ATF4P18848 Y_RNA.277-201ENST00000364754 102 ntBASIC3.27□□□□□ -1.89
ATF4P18848 RNU6-57P-201ENST00000411348 103 ntBASIC3.27□□□□□ -1.89
ATF4P18848 MTCO1P5-201ENST00000433573 344 ntBASIC3.27□□□□□ -1.89
ATF4P18848 RPS29P19-201ENST00000479709 171 ntBASIC3.27□□□□□ -1.89
ATF4P18848 AF213884.1-201ENST00000488102 463 ntBASIC3.27□□□□□ -1.89
ATF4P18848 SNORA70.12-201ENST00000516084 153 ntBASIC3.27□□□□□ -1.89
ATF4P18848 MIR4738-201ENST00000579134 87 ntBASIC3.27□□□□□ -1.89
ATF4P18848 AC010900.2-201ENST00000604508 210 ntBASIC3.27□□□□□ -1.89
ATF4P18848 MIR6891-201ENST00000618788 93 ntBASIC3.27□□□□□ -1.89
ATF4P18848 MIR6758-201ENST00000620653 63 ntBASIC3.27□□□□□ -1.89
ATF4P18848 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.27□□□□□ -1.89
ATF4P18848 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATF4P18848 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATF4P18848 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATF4P18848 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ATF4P18848 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
ATF4P18848 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.26□□□□□ -1.89
ATF4P18848 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ATF4P18848 Y_RNA.65-201ENST00000362846 100 ntBASIC3.26□□□□□ -1.89
ATF4P18848 Y_RNA.329-201ENST00000365209 107 ntBASIC3.26□□□□□ -1.89
ATF4P18848 SNORA25B-201ENST00000365507 128 ntBASIC3.26□□□□□ -1.89
ATF4P18848 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
ATF4P18848 Y_RNA.418-201ENST00000384029 102 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-1235P-201ENST00000384559 107 ntBASIC3.26□□□□□ -1.89
ATF4P18848 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATF4P18848 AL139095.1-201ENST00000404326 391 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-710P-201ENST00000410424 105 ntBASIC3.26□□□□□ -1.89
ATF4P18848 AC123900.1-201ENST00000420390 96 ntBASIC3.26□□□□□ -1.89
ATF4P18848 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.26□□□□□ -1.89
ATF4P18848 RPL23AP46-201ENST00000438548 490 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-498P-201ENST00000459468 107 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-221P-201ENST00000459541 99 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RN7SL98P-201ENST00000462271 300 ntBASIC3.26□□□□□ -1.89
ATF4P18848 AC109327.1-201ENST00000471666 403 ntBASIC3.26□□□□□ -1.89
ATF4P18848 AC093259.1-201ENST00000509755 300 ntBASIC3.26□□□□□ -1.89
ATF4P18848 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-991P-201ENST00000516168 107 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-436P-201ENST00000516171 114 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-966P-201ENST00000516479 104 ntBASIC3.26□□□□□ -1.89
ATF4P18848 SNORA27.4-201ENST00000516650 95 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RNU6-111P-201ENST00000517179 105 ntBASIC3.26□□□□□ -1.89
ATF4P18848 MIR2116-201ENST00000517221 80 ntBASIC3.26□□□□□ -1.89
ATF4P18848 IGLVIV-65-201ENST00000517313 360 ntBASIC3.26□□□□□ -1.89
ATF4P18848 AC025754.2-201ENST00000606491 432 ntBASIC3.26□□□□□ -1.89
ATF4P18848 uc_338.13-201ENST00000618243 179 ntBASIC3.26□□□□□ -1.89
ATF4P18848 U6.115-201ENST00000636045 103 ntBASIC3.26□□□□□ -1.89
ATF4P18848 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.26□□□□□ -1.89
ATF4P18848 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATF4P18848 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATF4P18848 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.26□□□□□ -1.89
ATF4P18848 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ATF4P18848 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATF4P18848 SNORD115-30-201ENST00000364117 82 ntBASIC3.25□□□□□ -1.89
ATF4P18848 RNU6-418P-201ENST00000384035 107 ntBASIC3.25□□□□□ -1.89
ATF4P18848 SNORD14D-201ENST00000384390 87 ntBASIC3.25□□□□□ -1.89
ATF4P18848 SNORA70C-201ENST00000384538 135 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AL031003.1-201ENST00000404229 172 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AC008134.1-201ENST00000420943 193 ntBASIC3.25□□□□□ -1.89
ATF4P18848 RPS29P17-201ENST00000430795 166 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.25□□□□□ -1.89
ATF4P18848 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.25□□□□□ -1.89
ATF4P18848 PHBP16-201ENST00000446318 950 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AC016717.1-201ENST00000448918 286 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AC091959.1-201ENST00000495857 238 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.25□□□□□ -1.89
ATF4P18848 SNORA4.4-201ENST00000515921 135 ntBASIC3.25□□□□□ -1.89
ATF4P18848 RNU4-71P-201ENST00000516258 113 ntBASIC3.25□□□□□ -1.89
ATF4P18848 RN7SKP21-201ENST00000516503 220 ntBASIC3.25□□□□□ -1.89
ATF4P18848 RNU6-56P-201ENST00000516986 93 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.25□□□□□ -1.89
ATF4P18848 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.25□□□□□ -1.89
ATF4P18848 MIR3160-1-201ENST00000577972 85 ntBASIC3.25□□□□□ -1.89
ATF4P18848 DEFB117-201ENST00000602356 141 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AC113403.1-201ENST00000604910 193 ntBASIC3.25□□□□□ -1.89
ATF4P18848 AC013412.1-201ENST00000610687 192 ntBASIC3.25□□□□□ -1.89
ATF4P18848 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.25□□□□□ -1.89
ATF4P18848 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.25□□□□□ -1.89
ATF4P18848 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATF4P18848 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ATF4P18848 MIR331-201ENST00000362302 94 ntBASIC3.24□□□□□ -1.89
ATF4P18848 RNU6-805P-201ENST00000365643 106 ntBASIC3.24□□□□□ -1.89
ATF4P18848 CYCSP19-201ENST00000411715 316 ntBASIC3.24□□□□□ -1.89
ATF4P18848 AC004975.1-201ENST00000428733 208 ntBASIC3.24□□□□□ -1.89
ATF4P18848 RPL23AP81-201ENST00000455252 467 ntBASIC3.24□□□□□ -1.89
ATF4P18848 AL139109.1-201ENST00000455491 297 ntBASIC3.24□□□□□ -1.89
ATF4P18848 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.24□□□□□ -1.89
ATF4P18848 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.24□□□□□ -1.89
ATF4P18848 AC110768.1-201ENST00000509222 400 ntBASIC3.24□□□□□ -1.89
ATF4P18848 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
ATF4P18848 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.24□□□□□ -1.89
ATF4P18848 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.24□□□□□ -1.89
ATF4P18848 PRELID2P1-201ENST00000552837 301 ntBASIC3.24□□□□□ -1.89
ATF4P18848 AL162424.1-201ENST00000602325 221 ntBASIC3.24□□□□□ -1.89
ATF4P18848 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ATF4P18848 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
ATF4P18848 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.23□□□□□ -1.89
ATF4P18848 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms