Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MT-TQ-201ENST00000387372 72 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 MIR1827-201ENST00000408549 66 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 AL139421.1-201ENST00000423010 169 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.77□□□□□ -2.53
HMGA1P17096 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.77□□□□□ -2.53
HMGA1P17096 ART2BP-201ENST00000453501 499 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.77□□□□□ -2.53
HMGA1P17096 AK6P2-201ENST00000549020 471 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 SNRPGP1-201ENST00000553864 222 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 AC021231.3-201ENST00000558497 370 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 MIR3681-201ENST00000580089 72 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.77□□□□□ -2.53
HMGA1P17096 AC011921.3-201ENST00000605540 361 ntBASIC-0.77□□□□□ -2.53
HMGA1P17096 AC016831.2-201ENST00000417179 352 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 TMEM251P1-201ENST00000503717 318 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.78□□□□□ -2.53
HMGA1P17096 RNU6-917P-201ENST00000516294 104 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 IGKV1-22-201ENST00000524313 326 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 AP001328.1-201ENST00000528550 176 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 AC009712.1-201ENST00000564938 316 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 AC090615.1-201ENST00000577519 154 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.78□□□□□ -2.53
HMGA1P17096 AC242628.1-201ENST00000606810 391 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 AC092656.1-203ENST00000624134 423 ntBASIC-0.78□□□□□ -2.53
HMGA1P17096 MTND4P4-201ENST00000439033 1366 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 RNY4P3-201ENST00000365254 95 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 RNU6-39P-201ENST00000384344 107 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 MIR520G-201ENST00000385064 90 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 MIR520H-201ENST00000385126 88 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.79□□□□□ -2.54
HMGA1P17096 AL606517.1-201ENST00000446914 387 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 AC020550.1-201ENST00000447385 163 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 ZNF886P-201ENST00000450781 723 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.79□□□□□ -2.54
HMGA1P17096 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
HMGA1P17096 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.79□□□□□ -2.54
HMGA1P17096 SNORA31.19-201ENST00000517079 126 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.79□□□□□ -2.54
HMGA1P17096 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.79□□□□□ -2.54
HMGA1P17096 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.79□□□□□ -2.54
HMGA1P17096 RNU6-622P-201ENST00000384272 103 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 FCF1P10-201ENST00000407590 479 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.8□□□□□ -2.54
HMGA1P17096 BX119904.4-201ENST00000424402 301 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.8□□□□□ -2.54
HMGA1P17096 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.8□□□□□ -2.54
HMGA1P17096 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.8□□□□□ -2.54
HMGA1P17096 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.8□□□□□ -2.54
HMGA1P17096 SNORA14.1-201ENST00000516113 141 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 RNU6-885P-201ENST00000516607 104 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 RNA5SP94-201ENST00000516917 108 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 AC009902.1-201ENST00000519351 183 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.8□□□□□ -2.54
HMGA1P17096 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.8□□□□□ -2.54
HMGA1P17096 AC007014.2-201ENST00000615581 479 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 SEPT14P17-201ENST00000617978 177 ntBASIC-0.8□□□□□ -2.54
HMGA1P17096 SNORD114-15-201ENST00000364687 72 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 SNORA8.2-201ENST00000384372 139 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 TPMTP2-201ENST00000414372 726 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.81□□□□□ -2.54
HMGA1P17096 AL606517.2-201ENST00000442855 241 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 AL050341.1-201ENST00000447743 313 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 MTCO1P31-201ENST00000506355 492 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 AC022868.1-201ENST00000517767 391 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 LRRC34P1-201ENST00000542742 915 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 RPL21P136-201ENST00000605378 396 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 AL513423.1-201ENST00000621695 132 ntBASIC-0.81□□□□□ -2.54
HMGA1P17096 MTND4P21-201ENST00000453886 1357 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 RNU6-223P-201ENST00000362830 107 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 SNORA32.2-201ENST00000384049 122 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 RNU6-269P-201ENST00000391077 97 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 RNU4-46P-201ENST00000410818 138 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.82□□□□□ -2.54
HMGA1P17096 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.82□□□□□ -2.54
HMGA1P17096 AL929288.2-201ENST00000446368 407 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.82□□□□□ -2.54
HMGA1P17096 LINC01399-202ENST00000458450 244 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AC010531.2-201ENST00000465012 153 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.82□□□□□ -2.54
HMGA1P17096 AC091860.1-201ENST00000505723 432 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AC093809.1-201ENST00000509155 340 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 SNORD111.1-201ENST00000516421 86 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 SNORA31.10-201ENST00000516482 106 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
HMGA1P17096 AL034555.1-201ENST00000604816 211 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AC008759.3-201ENST00000613300 508 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AC009268.2-201ENST00000621925 457 ntBASIC-0.82□□□□□ -2.54
HMGA1P17096 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.82□□□□□ -2.54
HMGA1P17096 MIR1-1-201ENST00000362147 71 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 RNU6-199P-201ENST00000362954 107 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 SNORD116-23-201ENST00000384645 92 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.83□□□□□ -2.54
HMGA1P17096 RNA5SP390-201ENST00000410191 113 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 MTCO2P8-201ENST00000412213 658 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 BTF3P11-201ENST00000426582 477 ntBASIC-0.83□□□□□ -2.54
HMGA1P17096 TIMM9P3-201ENST00000428659 274 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms