Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF28P17035 AL021368.2-201ENST00000606125 5352 ntBASIC3.26□□□□□ -1.89
ZNF28P17035 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
ZNF28P17035 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ZNF28P17035 TNPO1P3-201ENST00000436471 2662 ntBASIC3.26□□□□□ -1.89
ZNF28P17035 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
ZNF28P17035 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF28P17035 AC004944.1-201ENST00000517807 3059 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 RNU6-1310P-201ENST00000384153 107 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 MIR591-201ENST00000385290 95 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 MIR320B2-201ENST00000408479 138 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 ELOCP21-201ENST00000412558 336 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 RPS29P31-201ENST00000446147 164 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 IFNA11P-201ENST00000446352 526 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 RNU7-170P-201ENST00000459303 61 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 RPS29P2-201ENST00000479278 136 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 AL049830.2-201ENST00000480072 201 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 MIR3609-201ENST00000582661 80 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 MIR3136-201ENST00000583498 78 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 AC012493.2-201ENST00000595083 291 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 DEFB117-201ENST00000602356 141 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.25□□□□□ -1.89
ZNF28P17035 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF28P17035 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF28P17035 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF28P17035 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF28P17035 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF28P17035 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF28P17035 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF28P17035 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ZNF28P17035 RNU6-653P-201ENST00000363074 106 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 RNU6-727P-201ENST00000363592 107 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ZNF28P17035 U3.26-201ENST00000391236 204 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 BTF3P11-201ENST00000426582 477 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.24□□□□□ -1.89
ZNF28P17035 RPS15AP5-201ENST00000436276 388 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.24□□□□□ -1.89
ZNF28P17035 Z75741.1-201ENST00000446793 314 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AC107626.1-201ENST00000471084 183 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 HMGB3P3-201ENST00000510526 400 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.24□□□□□ -1.89
ZNF28P17035 SCARNA13-201ENST00000516672 275 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.24□□□□□ -1.89
ZNF28P17035 AC105137.2-201ENST00000569073 466 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 MIR4276-201ENST00000584832 70 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AL136164.4-201ENST00000625013 2135 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AC002546.1-201ENST00000588041 2504 ntBASIC3.24□□□□□ -1.89
ZNF28P17035 AL356274.2-201ENST00000624379 3752 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF28P17035 RNU6-1272P-201ENST00000362776 107 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 RNU6-283P-201ENST00000364788 107 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 SNORA40.19-201ENST00000390846 128 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 RNU2-54P-201ENST00000410299 190 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 RNU5E-9P-201ENST00000411164 104 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 AL451074.5-201ENST00000415894 435 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 AC006989.1-201ENST00000427212 131 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 RPL23AP82-202ENST00000427528 469 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF28P17035 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 AIG1P1-201ENST00000503376 148 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 FCF1P8-201ENST00000510322 597 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 RNU1-61P-201ENST00000516107 151 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.23□□□□□ -1.89
ZNF28P17035 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF28P17035 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 MIR4738-201ENST00000579134 87 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF28P17035 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.23□□□□□ -1.89
ZNF28P17035 SNRPGP20-201ENST00000604477 205 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 RNVU1-4-201ENST00000612985 164 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 MIR3674-201ENST00000636576 68 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.23□□□□□ -1.89
ZNF28P17035 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ZNF28P17035 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ZNF28P17035 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF28P17035 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
ZNF28P17035 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZNF28P17035 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF28P17035 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF28P17035 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF28P17035 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF28P17035 RNU1-62P-201ENST00000362599 164 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 SNORD116-18-201ENST00000383961 92 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 SNORA18.3-201ENST00000384122 132 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 Y_RNA.441-201ENST00000384123 112 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 RNU6-1081P-201ENST00000384537 107 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 SNORA1.3-201ENST00000384676 136 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 Y_RNA.571-201ENST00000384753 98 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ZNF28P17035 RNU6-1248P-201ENST00000391096 64 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 RN7SKP111-201ENST00000410349 271 ntBASIC3.22□□□□□ -1.89
ZNF28P17035 RNA5SP475-201ENST00000410568 110 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms