Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNU4-15P-201ENST00000362613 141 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 RNY3P11-201ENST00000364153 102 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 Y_RNA.358-201ENST00000365491 99 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 Y_RNA.526-201ENST00000384572 110 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 RNU1-139P-201ENST00000391307 165 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 MIR208B-201ENST00000401172 77 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DOBP13765 MTND2P23-201ENST00000422990 651 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 AC096644.2-201ENST00000429278 159 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 RPL30P4-201ENST00000429309 333 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 USP9YP16-201ENST00000430287 407 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DOBP13765 USP9YP23-201ENST00000455085 407 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DOBP13765 RNU6-1114P-201ENST00000516022 107 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 RNA5SP54-201ENST00000516951 92 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DOBP13765 AC027288.2-201ENST00000553028 243 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 MIR5188-201ENST00000583467 113 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 AL356575.1-201ENST00000603008 283 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.28□□□□□ -2.04
HLA-DOBP13765 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DOBP13765 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DOBP13765 AC138915.1-201ENST00000565427 1685 ntBASIC2.28□□□□□ -2.05
HLA-DOBP13765 AC069528.2-201ENST00000624849 1991 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DOBP13765 Y_RNA.424-201ENST00000384063 103 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 MIR29B2-201ENST00000385055 81 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 Y_RNA.645-201ENST00000391229 102 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 RNU6-985P-201ENST00000410182 104 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
HLA-DOBP13765 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DOBP13765 AL590556.1-201ENST00000423231 483 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC063976.3-201ENST00000426849 329 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC080013.2-201ENST00000460866 323 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC073901.1-201ENST00000462471 408 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC007215.1-201ENST00000464893 276 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AP000870.1-201ENST00000472927 406 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC093852.1-201ENST00000503587 266 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 RNU6-58P-201ENST00000517143 103 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DOBP13765 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC105245.1-201ENST00000581934 244 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 MIR3199-1-201ENST00000582434 88 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 MIR3670-2-201ENST00000582974 65 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 MIR3670-1-201ENST00000584160 65 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 MIR3670-3-201ENST00000584855 65 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 MIR3670-4-201ENST00000612260 65 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 PCGEM1.1-201ENST00000613431 131 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AL132822.1-201ENST00000617063 513 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC091812.1-201ENST00000432235 1948 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 AC080128.1-201ENST00000474389 1917 ntBASIC2.27□□□□□ -2.05
HLA-DOBP13765 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HLA-DOBP13765 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DOBP13765 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DOBP13765 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DOBP13765 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DOBP13765 snoU2_19.1-201ENST00000362361 80 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 RNU6-222P-201ENST00000362438 107 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 RNU5F-3P-201ENST00000363767 117 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 SNORD14.1-201ENST00000365609 90 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 Y_RNA.485-201ENST00000384395 102 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 Y_RNA.557-201ENST00000384680 107 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 RNU6-159P-201ENST00000391080 106 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DOBP13765 AC145146.1-201ENST00000496370 254 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 AC022616.4-201ENST00000522985 181 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 COX6CP5-201ENST00000527162 228 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 AC004486.1-201ENST00000546846 233 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 MIR3616-201ENST00000584070 92 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 AC104695.3-201ENST00000604052 296 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 AC116312.1-201ENST00000606841 314 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 AC069294.1-201ENST00000608397 350 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 AL162373.1-201ENST00000620433 407 ntBASIC2.26□□□□□ -2.05
HLA-DOBP13765 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DOBP13765 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HLA-DOBP13765 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
HLA-DOBP13765 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
HLA-DOBP13765 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DOBP13765 SNORA5B-201ENST00000363786 132 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 U3.9-201ENST00000363823 204 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 Y_RNA.389-201ENST00000383924 113 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 Y_RNA.455-201ENST00000384230 98 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 RNU6-378P-201ENST00000384324 107 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 MIR218-1-201ENST00000384999 110 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 SNORA46.1-201ENST00000391069 153 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 RNU6-1093P-201ENST00000391194 107 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 NDUFB4P4-201ENST00000404822 243 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 MIR320B2-201ENST00000408479 138 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 RNU6-101P-201ENST00000410323 104 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 RPL19P1-201ENST00000411635 428 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 HMGB3P2-201ENST00000411913 584 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 RPS15AP7-201ENST00000439294 405 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DOBP13765 UBBP3-201ENST00000445497 241 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 AL109933.2-201ENST00000452651 260 ntBASIC2.25□□□□□ -2.05
HLA-DOBP13765 AP001486.1-201ENST00000463339 476 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms