Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU1-76P-201ENST00000362903 159 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 Y_RNA.188-201ENST00000363952 111 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 Y_RNA.276-201ENST00000364732 109 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 U3.13-201ENST00000364804 214 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 SNORA51.4-201ENST00000364993 124 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 SNORA36A-201ENST00000384221 132 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 Y_RNA.556-201ENST00000384677 113 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 AL359511.1-201ENST00000402970 211 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.21□□□□□ -1.9
SNRPA1P09661 FCF1P4-201ENST00000448326 183 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 Y_RNA.668-201ENST00000516233 93 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 RNU6-1271P-201ENST00000517049 105 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 AC091144.1-201ENST00000519573 138 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 AL442163.3-201ENST00000554110 156 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 AC007375.1-201ENST00000554513 578 ntBASIC3.21□□□□□ -1.9
SNRPA1P09661 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.21□□□□□ -1.9
SNRPA1P09661 AC099654.7-201ENST00000635788 2127 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.2□□□□□ -1.9
SNRPA1P09661 Y_RNA.27-201ENST00000362540 103 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 RNU6-770P-201ENST00000363929 105 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 RNU6-17P-201ENST00000384245 107 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 Y_RNA.461-201ENST00000384263 103 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 RNU6-472P-201ENST00000384299 107 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 RNU6-18P-201ENST00000384527 107 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 RNA5SP210-201ENST00000391034 120 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 AL133475.1-201ENST00000404414 305 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 MIR1261-201ENST00000408659 82 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 GPM6BP3-201ENST00000442797 145 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.2□□□□□ -1.9
SNRPA1P09661 AC022868.1-201ENST00000517767 391 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 HSPE1P20-201ENST00000538133 289 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.2□□□□□ -1.9
SNRPA1P09661 AC090617.3-201ENST00000573670 475 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 AC130454.1-201ENST00000622948 401 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 U6.92-201ENST00000636464 89 ntBASIC3.2□□□□□ -1.9
SNRPA1P09661 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNRPA1P09661 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 Y_RNA.105-201ENST00000363182 111 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 Y_RNA.307-201ENST00000365022 117 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 RNU6-142P-201ENST00000384019 107 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 MIR487A-201ENST00000385009 80 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 MT-TW-201ENST00000387382 68 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 RNU4-53P-201ENST00000410828 140 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.19□□□□□ -1.9
SNRPA1P09661 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.19□□□□□ -1.9
SNRPA1P09661 RPL39P29-201ENST00000447779 157 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 RN7SL283P-201ENST00000489055 303 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 RN7SL636P-201ENST00000497504 294 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
SNRPA1P09661 AC090897.2-201ENST00000581715 130 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 AL356157.2-201ENST00000605122 111 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 RMST_6.1-201ENST00000611980 203 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 ZNF658B-202ENST00000615961 3375 ntBASIC3.19□□□□□ -1.9
SNRPA1P09661 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.19□□□□□ -1.9
SNRPA1P09661 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNRPA1P09661 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SNRPA1P09661 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNRPA1P09661 RNU5B-2P-201ENST00000363036 113 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 RNA5SP456-201ENST00000364002 114 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 SNORD115-32-201ENST00000364079 82 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 RNU6-1141P-201ENST00000364520 107 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 RNU6-1318P-201ENST00000365389 103 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 Y_RNA.458-201ENST00000384240 102 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 RNU6-622P-201ENST00000384272 103 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 Y_RNA.483-201ENST00000384380 101 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 MT-TG-201ENST00000387429 68 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 AC108059.2-201ENST00000434626 151 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 RNU7-23P-201ENST00000459465 62 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 AP000870.1-201ENST00000472927 406 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 AC016632.1-201ENST00000503994 196 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.18□□□□□ -1.9
SNRPA1P09661 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.18□□□□□ -1.9
SNRPA1P09661 MIR3124-201ENST00000582636 67 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 AC010620.2-201ENST00000600135 313 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 AC091152.3-201ENST00000604227 325 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 AC062037.2-201ENST00000610137 73 ntBASIC3.18□□□□□ -1.9
SNRPA1P09661 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
SNRPA1P09661 HAUS6P2-201ENST00000433254 2404 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNRPA1P09661 Y_RNA.376-201ENST00000365638 108 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 RNU6-19P-201ENST00000384718 107 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 MIR1302-6-201ENST00000408466 90 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 RNU6-121P-201ENST00000410525 99 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.17□□□□□ -1.9
SNRPA1P09661 PTGES3P4-201ENST00000426243 356 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 AC244670.1-201ENST00000436879 112 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 LINC01399-202ENST00000458450 244 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 snoU13.6-201ENST00000458785 104 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 AC107626.1-201ENST00000471084 183 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 AC067942.3-201ENST00000512025 362 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 RNU6-570P-201ENST00000517051 105 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 MIR5571-201ENST00000577998 113 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 AL359198.2-201ENST00000611836 194 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 AL450472.1-202ENST00000637286 180 ntBASIC3.17□□□□□ -1.9
SNRPA1P09661 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms