Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC105758.1-201ENST00000506038 399 ntBASIC0.7□□□□□ -2.3
TPM1P09493 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
TPM1P09493 RN7SKP265-201ENST00000516448 223 ntBASIC0.7□□□□□ -2.3
TPM1P09493 AC103996.1-201ENST00000555468 102 ntBASIC0.7□□□□□ -2.3
TPM1P09493 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.7□□□□□ -2.3
TPM1P09493 AL158050.2-201ENST00000605336 568 ntBASIC0.7□□□□□ -2.3
TPM1P09493 snoU13.31-201ENST00000607291 104 ntBASIC0.7□□□□□ -2.3
TPM1P09493 AC104458.1-201ENST00000608243 463 ntBASIC0.7□□□□□ -2.3
TPM1P09493 GHRLOS.1-201ENST00000610995 70 ntBASIC0.7□□□□□ -2.3
TPM1P09493 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
TPM1P09493 RNU6-169P-201ENST00000365336 107 ntBASIC0.69□□□□□ -2.3
TPM1P09493 Y_RNA.480-201ENST00000384364 102 ntBASIC0.69□□□□□ -2.3
TPM1P09493 RNU6-417P-201ENST00000384712 107 ntBASIC0.69□□□□□ -2.3
TPM1P09493 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.69□□□□□ -2.3
TPM1P09493 AC016717.1-201ENST00000448918 286 ntBASIC0.69□□□□□ -2.3
TPM1P09493 MTCO2P6-201ENST00000463134 685 ntBASIC0.69□□□□□ -2.3
TPM1P09493 SRRM1P2-201ENST00000464531 1192 ntBASIC0.69□□□□□ -2.3
TPM1P09493 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.69□□□□□ -2.3
TPM1P09493 SNORA31.10-201ENST00000516482 106 ntBASIC0.69□□□□□ -2.3
TPM1P09493 RNU6-922P-201ENST00000516753 99 ntBASIC0.69□□□□□ -2.3
TPM1P09493 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.69□□□□□ -2.3
TPM1P09493 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.69□□□□□ -2.3
TPM1P09493 AC005771.1-201ENST00000585581 349 ntBASIC0.69□□□□□ -2.3
TPM1P09493 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.69□□□□□ -2.3
TPM1P09493 AC099654.13-201ENST00000639774 207 ntBASIC0.69□□□□□ -2.3
TPM1P09493 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.69□□□□□ -2.3
TPM1P09493 RNA5SP361-201ENST00000362686 118 ntBASIC0.68□□□□□ -2.3
TPM1P09493 Y_RNA.287-201ENST00000364853 94 ntBASIC0.68□□□□□ -2.3
TPM1P09493 Y_RNA.363-201ENST00000365529 113 ntBASIC0.68□□□□□ -2.3
TPM1P09493 RNU6-827P-201ENST00000365553 106 ntBASIC0.68□□□□□ -2.3
TPM1P09493 RNU6-505P-201ENST00000384427 107 ntBASIC0.68□□□□□ -2.3
TPM1P09493 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
TPM1P09493 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
TPM1P09493 RNA5SP323-201ENST00000391094 133 ntBASIC0.68□□□□□ -2.3
TPM1P09493 AF228730.1-201ENST00000397972 663 ntBASIC0.68□□□□□ -2.3
TPM1P09493 MIR942-201ENST00000401111 86 ntBASIC0.68□□□□□ -2.3
TPM1P09493 RPS26P5-201ENST00000418544 335 ntBASIC0.68□□□□□ -2.3
TPM1P09493 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.68□□□□□ -2.3
TPM1P09493 MTCO2P23-201ENST00000425216 680 ntBASIC0.68□□□□□ -2.3
TPM1P09493 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.68□□□□□ -2.3
TPM1P09493 AL606517.2-201ENST00000442855 241 ntBASIC0.68□□□□□ -2.3
TPM1P09493 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.68□□□□□ -2.3
TPM1P09493 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.68□□□□□ -2.3
TPM1P09493 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.68□□□□□ -2.3
TPM1P09493 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.68□□□□□ -2.3
TPM1P09493 AL390123.1-201ENST00000603216 237 ntBASIC0.68□□□□□ -2.3
TPM1P09493 AC022418.1-201ENST00000624118 445 ntBASIC0.68□□□□□ -2.3
TPM1P09493 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.68□□□□□ -2.3
TPM1P09493 SNORD3E-202ENST00000627253 216 ntBASIC0.68□□□□□ -2.3
TPM1P09493 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
TPM1P09493 MIR122-201ENST00000385044 85 ntBASIC0.67□□□□□ -2.3
TPM1P09493 RNA5SP467-201ENST00000391274 118 ntBASIC0.67□□□□□ -2.3
TPM1P09493 RN7SKP200-201ENST00000410564 320 ntBASIC0.67□□□□□ -2.3
TPM1P09493 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.67□□□□□ -2.3
TPM1P09493 RAP1BP2-201ENST00000478270 544 ntBASIC0.67□□□□□ -2.3
TPM1P09493 HMGN1P7-201ENST00000491722 313 ntBASIC0.67□□□□□ -2.3
TPM1P09493 MIR4524B-201ENST00000581569 115 ntBASIC0.67□□□□□ -2.3
TPM1P09493 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.67□□□□□ -2.3
TPM1P09493 AC005562.2-201ENST00000618264 111 ntBASIC0.67□□□□□ -2.3
TPM1P09493 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.67□□□□□ -2.3
TPM1P09493 AC006927.3-201ENST00000638789 384 ntBASIC0.67□□□□□ -2.3
TPM1P09493 Y_RNA.367-201ENST00000365544 101 ntBASIC0.66□□□□□ -2.3
TPM1P09493 RNU6-969P-201ENST00000383900 105 ntBASIC0.66□□□□□ -2.3
TPM1P09493 SNORA80D-201ENST00000384488 135 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.66□□□□□ -2.3
TPM1P09493 AP000275.1-201ENST00000411943 390 ntBASIC0.66□□□□□ -2.3
TPM1P09493 HMGN1P14-201ENST00000412459 517 ntBASIC0.66□□□□□ -2.3
TPM1P09493 Z82205.1-201ENST00000428456 297 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.66□□□□□ -2.3
TPM1P09493 AL606662.1-201ENST00000445763 553 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC079382.1-201ENST00000493346 557 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC079140.5-201ENST00000507882 310 ntBASIC0.66□□□□□ -2.3
TPM1P09493 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC090572.1-201ENST00000519251 160 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC022878.1-201ENST00000530684 149 ntBASIC0.66□□□□□ -2.3
TPM1P09493 MTND4P33-201ENST00000556706 766 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.66□□□□□ -2.3
TPM1P09493 AL391840.1-201ENST00000571144 367 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC112191.3-201ENST00000604371 277 ntBASIC0.66□□□□□ -2.3
TPM1P09493 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.66□□□□□ -2.3
TPM1P09493 AL359821.1-201ENST00000605519 182 ntBASIC0.66□□□□□ -2.3
TPM1P09493 uc_338.17-201ENST00000619633 179 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC006001.4-201ENST00000622243 395 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.66□□□□□ -2.3
TPM1P09493 AC005858.4-201ENST00000623191 700 ntBASIC0.66□□□□□ -2.3
TPM1P09493 AL078595.3-201ENST00000623815 1166 ntBASIC0.66□□□□□ -2.3
TPM1P09493 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
TPM1P09493 MIR549A-201ENST00000385268 96 ntBASIC0.65□□□□□ -2.31
TPM1P09493 TIMM9P3-201ENST00000428659 274 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AL512286.1-201ENST00000439244 400 ntBASIC0.65□□□□□ -2.31
TPM1P09493 MTCO3P18-201ENST00000440206 761 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.65□□□□□ -2.31
TPM1P09493 SNORA25.17-201ENST00000517184 124 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.65□□□□□ -2.31
TPM1P09493 Z99497.2-201ENST00000603634 310 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AC091304.9-201ENST00000612091 226 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AC027807.2-201ENST00000616099 408 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AL513423.1-201ENST00000621695 132 ntBASIC0.65□□□□□ -2.31
TPM1P09493 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms