Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-1042P-201ENST00000384204 107 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 MIR549A-201ENST00000385268 96 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 SNORA67.6-201ENST00000391093 99 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RNU6-1093P-201ENST00000391194 107 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 MRPS10P2-201ENST00000431226 381 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AL359672.1-201ENST00000442302 409 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC016925.1-201ENST00000458303 298 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC010531.2-201ENST00000465012 153 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RPL9P9-202ENST00000466501 579 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC083904.1-201ENST00000487828 231 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC091435.1-201ENST00000505442 584 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC097473.1-201ENST00000508142 408 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 Y_RNA.693-201ENST00000516641 110 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RNU6-567P-201ENST00000516746 107 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 Y_RNA.704-201ENST00000516851 102 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 SCOCP1-201ENST00000554676 349 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AL157687.1-201ENST00000554853 619 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 MIR5094-201ENST00000578766 85 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 MIR4303-201ENST00000581299 66 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC005786.1-201ENST00000588553 154 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC092954.2-201ENST00000609103 430 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 RMST_3.1-201ENST00000611651 109 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AL353997.5-201ENST00000618886 171 ntBASIC1.28□□□□□ -2.2
HLA-DPB1P04440 FER-210ENST00000628534 558 ntTSL 5 BASIC1.28□□□□□ -2.2
HLA-DPB1P04440 AC245060.5-201ENST00000610778 3293 ntBASIC1.28□□□□□ -2.21
HLA-DPB1P04440 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
HLA-DPB1P04440 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 MTND5P9-201ENST00000503854 1755 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 RNU6-545P-201ENST00000362681 104 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.123-201ENST00000363338 102 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 RNU6-112P-201ENST00000363599 104 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 RNU6-457P-201ENST00000363999 107 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 SNORD31B-201ENST00000364977 69 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.372-201ENST00000365599 102 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 RNU6-1106P-201ENST00000390845 107 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 SNORA17.3-201ENST00000391159 129 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AL354695.1-201ENST00000427935 228 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 MTCO1P44-201ENST00000441935 243 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 MTND2P22-201ENST00000444325 1033 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AC019235.1-201ENST00000503847 207 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 RNU6-1332P-201ENST00000516666 104 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AL512360.1-201ENST00000555346 234 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.27□□□□□ -2.21
HLA-DPB1P04440 MIR4524B-201ENST00000581569 115 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 NBR2-204ENST00000587322 63 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 CTHRC1P1-201ENST00000605383 469 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AC064807.4-201ENST00000607201 407 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 AC103591.3-201ENST00000608684 209 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.27□□□□□ -2.21
HLA-DPB1P04440 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 MIR424-201ENST00000362227 98 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.231-201ENST00000364358 102 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 RNU4-75P-201ENST00000364621 146 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.481-201ENST00000384373 102 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 RNU2-16P-201ENST00000410712 136 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 RNU6-325P-201ENST00000411132 105 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 USP9YP28-201ENST00000435142 589 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AC099677.2-201ENST00000436385 175 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 RNU1-98P-201ENST00000458992 160 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AC005908.1-201ENST00000468701 347 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AF186996.7-201ENST00000492781 209 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AC107401.1-201ENST00000503426 685 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AC091885.1-201ENST00000506658 268 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AC016727.2-201ENST00000603988 621 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 RNU6-89P-201ENST00000606519 100 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 RMST_6.1-201ENST00000611980 203 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AL136221.1-201ENST00000621449 509 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.26□□□□□ -2.21
HLA-DPB1P04440 AC068205.3-201ENST00000636385 468 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.26□□□□□ -2.21
HLA-DPB1P04440 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.41-201ENST00000362646 102 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 RNU6-483P-201ENST00000384088 108 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 Y_RNA.559-201ENST00000384686 107 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 SNORA67.5-201ENST00000391036 107 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 EIF4E2P1-201ENST00000393781 255 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 MIR450B-201ENST00000401182 78 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 RNU6-174P-201ENST00000410406 106 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 AC004866.1-201ENST00000411748 78 ntBASIC1.25□□□□□ -2.21
HLA-DPB1P04440 VN1R36P-201ENST00000414936 291 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms