Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.52□□□□□ -2.49
APOBP04114 AL133396.1-201ENST00000432048 687 ntBASIC-0.52□□□□□ -2.49
APOBP04114 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.52□□□□□ -2.49
APOBP04114 SNORA25.11-201ENST00000515935 105 ntBASIC-0.52□□□□□ -2.49
APOBP04114 AC024995.1-201ENST00000523014 93 ntBASIC-0.52□□□□□ -2.49
APOBP04114 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.52□□□□□ -2.49
APOBP04114 AC004223.2-201ENST00000590309 544 ntBASIC-0.52□□□□□ -2.49
APOBP04114 AL670379.3-201ENST00000605040 251 ntBASIC-0.52□□□□□ -2.49
APOBP04114 MIR3976-201ENST00000606807 139 ntBASIC-0.52□□□□□ -2.49
APOBP04114 SNORA25.18-201ENST00000607153 114 ntBASIC-0.52□□□□□ -2.49
APOBP04114 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.52□□□□□ -2.49
APOBP04114 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.52□□□□□ -2.49
APOBP04114 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.52□□□□□ -2.49
APOBP04114 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.52□□□□□ -2.49
APOBP04114 AC125232.2-201ENST00000592457 143 ntBASIC-0.52□□□□□ -2.49
APOBP04114 AC116165.2-201ENST00000616705 206 ntBASIC-0.52□□□□□ -2.49
APOBP04114 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.52□□□□□ -2.49
APOBP04114 USP9YP22-201ENST00000438971 294 ntBASIC-0.52□□□□□ -2.49
APOBP04114 ZNF886P-201ENST00000450781 723 ntBASIC-0.52□□□□□ -2.49
APOBP04114 SNORD54-201ENST00000459159 67 ntBASIC-0.52□□□□□ -2.49
APOBP04114 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.52□□□□□ -2.49
APOBP04114 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.52□□□□□ -2.49
APOBP04114 AC010493.1-201ENST00000513479 292 ntBASIC-0.52□□□□□ -2.49
APOBP04114 AC007014.2-201ENST00000615581 479 ntBASIC-0.52□□□□□ -2.49
APOBP04114 SNORD51-201ENST00000384320 80 ntBASIC-0.53□□□□□ -2.49
APOBP04114 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.53□□□□□ -2.49
APOBP04114 SNORD83B-201ENST00000386745 93 ntBASIC-0.53□□□□□ -2.49
APOBP04114 SNORA3B-201ENST00000391305 131 ntBASIC-0.53□□□□□ -2.49
APOBP04114 MTCO2P18-201ENST00000457151 658 ntBASIC-0.53□□□□□ -2.49
APOBP04114 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.53□□□□□ -2.49
APOBP04114 AC116562.3-201ENST00000506136 177 ntBASIC-0.53□□□□□ -2.49
APOBP04114 RNU6-732P-201ENST00000516033 103 ntBASIC-0.53□□□□□ -2.49
APOBP04114 AC090572.1-201ENST00000519251 160 ntBASIC-0.53□□□□□ -2.49
APOBP04114 AC011195.1-201ENST00000578177 177 ntBASIC-0.53□□□□□ -2.49
APOBP04114 SUMO2P14-201ENST00000604488 293 ntBASIC-0.53□□□□□ -2.49
APOBP04114 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
APOBP04114 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.53□□□□□ -2.49
APOBP04114 SNORD32A-201ENST00000364805 84 ntBASIC-0.53□□□□□ -2.49
APOBP04114 SNORD82-201ENST00000365530 70 ntBASIC-0.53□□□□□ -2.49
APOBP04114 CBX3P9-201ENST00000402326 552 ntBASIC-0.53□□□□□ -2.49
APOBP04114 MTCO2P31-201ENST00000402702 684 ntBASIC-0.53□□□□□ -2.49
APOBP04114 AC021851.1-201ENST00000608537 1082 ntBASIC-0.53□□□□□ -2.49
APOBP04114 SNORD113.3-201ENST00000364630 78 ntBASIC-0.53□□□□□ -2.49
APOBP04114 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.53□□□□□ -2.49
APOBP04114 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.53□□□□□ -2.49
APOBP04114 RNA5SP94-201ENST00000516917 108 ntBASIC-0.53□□□□□ -2.49
APOBP04114 MIR4782-201ENST00000577987 79 ntBASIC-0.53□□□□□ -2.49
APOBP04114 RNU1-76P-201ENST00000362903 159 ntBASIC-0.54□□□□□ -2.5
APOBP04114 RNU6-652P-201ENST00000365488 107 ntBASIC-0.54□□□□□ -2.5
APOBP04114 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.54□□□□□ -2.5
APOBP04114 OR9P1P-201ENST00000496431 281 ntBASIC-0.54□□□□□ -2.5
APOBP04114 MTND4LP26-201ENST00000518144 282 ntBASIC-0.54□□□□□ -2.5
APOBP04114 AL353997.4-201ENST00000586196 166 ntBASIC-0.54□□□□□ -2.5
APOBP04114 AC011451.2-201ENST00000604303 598 ntBASIC-0.54□□□□□ -2.5
APOBP04114 AP002360.4-201ENST00000606980 481 ntBASIC-0.54□□□□□ -2.5
APOBP04114 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.54□□□□□ -2.5
APOBP04114 MIR1303-201ENST00000408625 86 ntBASIC-0.54□□□□□ -2.5
APOBP04114 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.54□□□□□ -2.5
APOBP04114 AC110760.3-202ENST00000515177 371 ntBASIC-0.54□□□□□ -2.5
APOBP04114 RNU2-60P-201ENST00000517290 128 ntBASIC-0.54□□□□□ -2.5
APOBP04114 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.54□□□□□ -2.5
APOBP04114 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.54□□□□□ -2.5
APOBP04114 AL390208.1-201ENST00000605885 644 ntBASIC-0.54□□□□□ -2.5
APOBP04114 SEPT14P17-201ENST00000617978 177 ntBASIC-0.54□□□□□ -2.5
APOBP04114 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
APOBP04114 RNU6-529P-201ENST00000363383 104 ntBASIC-0.54□□□□□ -2.5
APOBP04114 RNU4-76P-201ENST00000364509 141 ntBASIC-0.54□□□□□ -2.5
APOBP04114 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.54□□□□□ -2.5
APOBP04114 RNU6-331P-201ENST00000384724 107 ntBASIC-0.54□□□□□ -2.5
APOBP04114 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.54□□□□□ -2.5
APOBP04114 MIR6079-201ENST00000635807 62 ntBASIC-0.54□□□□□ -2.5
APOBP04114 MIR204-201ENST00000385200 110 ntBASIC-0.54□□□□□ -2.5
APOBP04114 TAF13P2-201ENST00000416876 286 ntBASIC-0.54□□□□□ -2.5
APOBP04114 SNORD114-19-201ENST00000363072 75 ntBASIC-0.55□□□□□ -2.5
APOBP04114 STAG3L5P-204ENST00000443759 179 ntBASIC-0.55□□□□□ -2.5
APOBP04114 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.55□□□□□ -2.5
APOBP04114 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.55□□□□□ -2.5
APOBP04114 RNA5SP216-201ENST00000516111 123 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNU2-53P-201ENST00000516257 147 ntBASIC-0.55□□□□□ -2.5
APOBP04114 AC034229.4-201ENST00000607861 441 ntBASIC-0.55□□□□□ -2.5
APOBP04114 MIR548B-201ENST00000385247 97 ntBASIC-0.55□□□□□ -2.5
APOBP04114 MIR760-201ENST00000390220 80 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNU6-679P-201ENST00000391003 106 ntBASIC-0.55□□□□□ -2.5
APOBP04114 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.55□□□□□ -2.5
APOBP04114 TPT1P7-201ENST00000458300 517 ntBASIC-0.55□□□□□ -2.5
APOBP04114 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.55□□□□□ -2.5
APOBP04114 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.55□□□□□ -2.5
APOBP04114 AC004067.1-201ENST00000608733 700 ntBASIC-0.55□□□□□ -2.5
APOBP04114 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.55□□□□□ -2.5
APOBP04114 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.55□□□□□ -2.5
APOBP04114 SMIM11P1-201ENST00000369586 178 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNY3P14-201ENST00000384309 102 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNU2-47P-201ENST00000410649 186 ntBASIC-0.55□□□□□ -2.5
APOBP04114 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
APOBP04114 AL512637.2-201ENST00000431287 1256 ntBASIC-0.55□□□□□ -2.5
APOBP04114 AC007000.2-201ENST00000442564 487 ntBASIC-0.55□□□□□ -2.5
APOBP04114 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.55□□□□□ -2.5
APOBP04114 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.55□□□□□ -2.5
APOBP04114 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms