Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR660-201ENST00000385235 97 ntBASIC-0.27□□□□□ -2.45
TNFP01375 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
TNFP01375 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.27□□□□□ -2.45
TNFP01375 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.27□□□□□ -2.45
TNFP01375 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.27□□□□□ -2.45
TNFP01375 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.27□□□□□ -2.45
TNFP01375 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC114811.1-201ENST00000507207 168 ntBASIC-0.27□□□□□ -2.45
TNFP01375 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC036111.3-201ENST00000526389 112 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AP003716.2-201ENST00000528260 108 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
TNFP01375 AC027288.2-201ENST00000553028 243 ntBASIC-0.27□□□□□ -2.45
TNFP01375 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.27□□□□□ -2.45
TNFP01375 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC146944.4-201ENST00000602697 718 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC012507.3-201ENST00000603556 477 ntBASIC-0.27□□□□□ -2.45
TNFP01375 MIR6755-201ENST00000619993 66 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.27□□□□□ -2.45
TNFP01375 AC131159.1-201ENST00000621854 213 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC112204.3-201ENST00000623822 332 ntBASIC-0.27□□□□□ -2.45
TNFP01375 SCARNA4-202ENST00000625402 129 ntBASIC-0.27□□□□□ -2.45
TNFP01375 MTND5P42-201ENST00000637720 498 ntBASIC-0.27□□□□□ -2.45
TNFP01375 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.27□□□□□ -2.45
TNFP01375 CDR1-202ENST00000625883 1485 ntBASIC-0.28□□□□□ -2.45
TNFP01375 MIR18A-201ENST00000362310 71 ntBASIC-0.28□□□□□ -2.45
TNFP01375 RNU6-369P-201ENST00000362515 102 ntBASIC-0.28□□□□□ -2.45
TNFP01375 RNA5SP98-201ENST00000363158 137 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AL451046.2-201ENST00000403074 277 ntBASIC-0.28□□□□□ -2.45
TNFP01375 MTCYBP2-201ENST00000407745 171 ntBASIC-0.28□□□□□ -2.45
TNFP01375 RNU4-30P-201ENST00000410245 143 ntBASIC-0.28□□□□□ -2.45
TNFP01375 VPS26BP1-201ENST00000417155 755 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AC096531.1-201ENST00000419107 107 ntBASIC-0.28□□□□□ -2.45
TNFP01375 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.28□□□□□ -2.45
TNFP01375 ZNF886P-201ENST00000450781 723 ntBASIC-0.28□□□□□ -2.45
TNFP01375 RPL18AP17-201ENST00000455326 198 ntBASIC-0.28□□□□□ -2.45
TNFP01375 OR9P1P-201ENST00000496431 281 ntBASIC-0.28□□□□□ -2.45
TNFP01375 HMGB1P28-201ENST00000507778 552 ntBASIC-0.28□□□□□ -2.45
TNFP01375 RNU6-583P-201ENST00000516012 92 ntBASIC-0.28□□□□□ -2.45
TNFP01375 RNU1-117P-201ENST00000517041 158 ntBASIC-0.28□□□□□ -2.45
TNFP01375 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AC022868.1-201ENST00000517767 391 ntBASIC-0.28□□□□□ -2.45
TNFP01375 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.28□□□□□ -2.45
TNFP01375 MIR4778-201ENST00000577635 80 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.28□□□□□ -2.45
TNFP01375 AC110760.3-201ENST00000598794 467 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AC022217.4-201ENST00000604389 163 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AL670379.3-201ENST00000605040 251 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AL592221.1-201ENST00000605266 382 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AC092634.7-201ENST00000621022 103 ntBASIC-0.28□□□□□ -2.45
TNFP01375 AC068792.1-201ENST00000621354 417 ntBASIC-0.28□□□□□ -2.45
TNFP01375 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.29□□□□□ -2.46
TNFP01375 RNA5SP275-201ENST00000363936 118 ntBASIC-0.29□□□□□ -2.46
TNFP01375 U8.7-201ENST00000364940 136 ntBASIC-0.29□□□□□ -2.46
TNFP01375 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.29□□□□□ -2.46
TNFP01375 RNU6-744P-201ENST00000365557 107 ntBASIC-0.29□□□□□ -2.46
TNFP01375 RNU6-481P-201ENST00000384194 107 ntBASIC-0.29□□□□□ -2.46
TNFP01375 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.29□□□□□ -2.46
TNFP01375 MIR1827-201ENST00000408549 66 ntBASIC-0.29□□□□□ -2.46
TNFP01375 MTND1P20-201ENST00000430341 950 ntBASIC-0.29□□□□□ -2.46
TNFP01375 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.29□□□□□ -2.46
TNFP01375 AL606489.2-201ENST00000433886 234 ntBASIC-0.29□□□□□ -2.46
TNFP01375 RPL7P55-201ENST00000450522 746 ntBASIC-0.29□□□□□ -2.46
TNFP01375 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.29□□□□□ -2.46
TNFP01375 RNU7-14P-201ENST00000459331 62 ntBASIC-0.29□□□□□ -2.46
TNFP01375 MTCO3P9-201ENST00000506989 781 ntBASIC-0.29□□□□□ -2.46
TNFP01375 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
TNFP01375 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.29□□□□□ -2.46
TNFP01375 AC115990.1-201ENST00000526957 301 ntBASIC-0.29□□□□□ -2.46
TNFP01375 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.29□□□□□ -2.46
TNFP01375 AC109446.1-201ENST00000566172 220 ntBASIC-0.29□□□□□ -2.46
TNFP01375 MIR3681-201ENST00000580089 72 ntBASIC-0.29□□□□□ -2.46
TNFP01375 MIR3192-201ENST00000584920 77 ntBASIC-0.29□□□□□ -2.46
TNFP01375 SNORA25.18-201ENST00000607153 114 ntBASIC-0.29□□□□□ -2.46
TNFP01375 AP000943.4-201ENST00000622912 357 ntBASIC-0.29□□□□□ -2.46
TNFP01375 AL078595.3-201ENST00000623815 1166 ntBASIC-0.29□□□□□ -2.46
TNFP01375 BX322639.1-202ENST00000423987 2213 ntBASIC-0.3□□□□□ -2.46
TNFP01375 MIR103A2-201ENST00000362154 78 ntBASIC-0.3□□□□□ -2.46
TNFP01375 RNU6-199P-201ENST00000362954 107 ntBASIC-0.3□□□□□ -2.46
TNFP01375 MIR593-201ENST00000384856 100 ntBASIC-0.3□□□□□ -2.46
TNFP01375 MIR573-201ENST00000384964 99 ntBASIC-0.3□□□□□ -2.46
TNFP01375 MIR196A2-201ENST00000385189 110 ntBASIC-0.3□□□□□ -2.46
TNFP01375 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.3□□□□□ -2.46
TNFP01375 SNORD65.1-201ENST00000390889 71 ntBASIC-0.3□□□□□ -2.46
TNFP01375 RNU6-127P-201ENST00000390897 107 ntBASIC-0.3□□□□□ -2.46
TNFP01375 RNU6-747P-201ENST00000390928 104 ntBASIC-0.3□□□□□ -2.46
TNFP01375 RNA5SP323-201ENST00000391094 133 ntBASIC-0.3□□□□□ -2.46
TNFP01375 RNU6-241P-201ENST00000391148 104 ntBASIC-0.3□□□□□ -2.46
TNFP01375 PCNPP3-201ENST00000393579 471 ntBASIC-0.3□□□□□ -2.46
TNFP01375 RNA5SP201-201ENST00000410316 124 ntBASIC-0.3□□□□□ -2.46
TNFP01375 AL627311.1-201ENST00000431514 115 ntBASIC-0.3□□□□□ -2.46
TNFP01375 HMGN1P33-201ENST00000432945 451 ntBASIC-0.3□□□□□ -2.46
TNFP01375 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.3□□□□□ -2.46
TNFP01375 SEPT7P4-201ENST00000437076 306 ntBASIC-0.3□□□□□ -2.46
TNFP01375 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.3□□□□□ -2.46
TNFP01375 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.3□□□□□ -2.46
TNFP01375 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.3□□□□□ -2.46
TNFP01375 snoU13.21-201ENST00000459368 105 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms