Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MBD3O95983 MTND5P26-201ENST00000426018 1752 ntBASIC1.54□□□□□ -2.16
MBD3O95983 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MBD3O95983 RNU5B-2P-201ENST00000363036 113 ntBASIC1.54□□□□□ -2.16
MBD3O95983 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
MBD3O95983 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
MBD3O95983 RNU6-296P-201ENST00000384608 107 ntBASIC1.54□□□□□ -2.16
MBD3O95983 MIR514A2-201ENST00000385131 88 ntBASIC1.54□□□□□ -2.16
MBD3O95983 MIR514A3-201ENST00000385132 88 ntBASIC1.54□□□□□ -2.16
MBD3O95983 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
MBD3O95983 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
MBD3O95983 EIF4E2P1-201ENST00000393781 255 ntBASIC1.54□□□□□ -2.16
MBD3O95983 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.54□□□□□ -2.16
MBD3O95983 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.54□□□□□ -2.16
MBD3O95983 C8orf59P1-201ENST00000429930 303 ntBASIC1.54□□□□□ -2.16
MBD3O95983 UBE2V1P8-201ENST00000437166 265 ntBASIC1.54□□□□□ -2.16
MBD3O95983 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.54□□□□□ -2.16
MBD3O95983 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MBD3O95983 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.54□□□□□ -2.16
MBD3O95983 AC097473.1-201ENST00000508142 408 ntBASIC1.54□□□□□ -2.16
MBD3O95983 AC025465.3-201ENST00000510570 311 ntBASIC1.54□□□□□ -2.16
MBD3O95983 SNORA31.17-201ENST00000516953 127 ntBASIC1.54□□□□□ -2.16
MBD3O95983 RNU6-835P-201ENST00000516974 104 ntBASIC1.54□□□□□ -2.16
MBD3O95983 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.54□□□□□ -2.16
MBD3O95983 AL157687.1-201ENST00000554853 619 ntBASIC1.54□□□□□ -2.16
MBD3O95983 AL160236.1-201ENST00000556317 195 ntBASIC1.54□□□□□ -2.16
MBD3O95983 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.54□□□□□ -2.16
MBD3O95983 CPDP1-201ENST00000579660 283 ntBASIC1.54□□□□□ -2.16
MBD3O95983 FGF7P1-201ENST00000582820 288 ntBASIC1.54□□□□□ -2.16
MBD3O95983 MIR5692C1-201ENST00000585309 91 ntBASIC1.54□□□□□ -2.16
MBD3O95983 AC064836.2-201ENST00000609491 462 ntBASIC1.54□□□□□ -2.16
MBD3O95983 Y_RNA.132-201ENST00000363421 102 ntBASIC1.53□□□□□ -2.16
MBD3O95983 RNU4-66P-201ENST00000365199 138 ntBASIC1.53□□□□□ -2.16
MBD3O95983 RNU6-1286P-201ENST00000383871 107 ntBASIC1.53□□□□□ -2.16
MBD3O95983 RNU6-1026P-201ENST00000384465 108 ntBASIC1.53□□□□□ -2.16
MBD3O95983 RNU6-360P-201ENST00000390944 104 ntBASIC1.53□□□□□ -2.16
MBD3O95983 SNORD37.1-201ENST00000390968 65 ntBASIC1.53□□□□□ -2.16
MBD3O95983 RNU6-1093P-201ENST00000391194 107 ntBASIC1.53□□□□□ -2.16
MBD3O95983 RNU6-648P-201ENST00000410190 107 ntBASIC1.53□□□□□ -2.16
MBD3O95983 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.53□□□□□ -2.16
MBD3O95983 ZNF72P-201ENST00000425869 1908 ntBASIC1.53□□□□□ -2.16
MBD3O95983 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.53□□□□□ -2.16
MBD3O95983 SRRM1P2-201ENST00000464531 1192 ntBASIC1.53□□□□□ -2.16
MBD3O95983 RNU6-323P-201ENST00000521915 107 ntBASIC1.53□□□□□ -2.16
MBD3O95983 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.53□□□□□ -2.16
MBD3O95983 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.53□□□□□ -2.16
MBD3O95983 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.53□□□□□ -2.16
MBD3O95983 AL118558.2-201ENST00000556294 238 ntBASIC1.53□□□□□ -2.16
MBD3O95983 MIR3611-201ENST00000584484 83 ntBASIC1.53□□□□□ -2.16
MBD3O95983 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.53□□□□□ -2.16
MBD3O95983 AC124864.2-201ENST00000624736 186 ntBASIC1.53□□□□□ -2.16
MBD3O95983 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.53□□□□□ -2.16
MBD3O95983 AC091812.1-201ENST00000432235 1948 ntBASIC1.52□□□□□ -2.17
MBD3O95983 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.52□□□□□ -2.17
MBD3O95983 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.52□□□□□ -2.17
MBD3O95983 RNU6-1085P-201ENST00000363576 107 ntBASIC1.52□□□□□ -2.17
MBD3O95983 Y_RNA.167-201ENST00000363735 109 ntBASIC1.52□□□□□ -2.17
MBD3O95983 RNU6-60P-201ENST00000364792 103 ntBASIC1.52□□□□□ -2.17
MBD3O95983 Y_RNA.378-201ENST00000365652 113 ntBASIC1.52□□□□□ -2.17
MBD3O95983 RNU6-259P-201ENST00000383999 107 ntBASIC1.52□□□□□ -2.17
MBD3O95983 RNU6-214P-201ENST00000384130 107 ntBASIC1.52□□□□□ -2.17
MBD3O95983 SNORA29-201ENST00000384183 140 ntBASIC1.52□□□□□ -2.17
MBD3O95983 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
MBD3O95983 SNRPEP10-201ENST00000420249 274 ntBASIC1.52□□□□□ -2.17
MBD3O95983 MTCO1P20-201ENST00000425366 358 ntBASIC1.52□□□□□ -2.17
MBD3O95983 FTH1P12-201ENST00000432137 551 ntBASIC1.52□□□□□ -2.17
MBD3O95983 AC007215.1-201ENST00000464893 276 ntBASIC1.52□□□□□ -2.17
MBD3O95983 AC010531.2-201ENST00000465012 153 ntBASIC1.52□□□□□ -2.17
MBD3O95983 RNU6-856P-201ENST00000516959 98 ntBASIC1.52□□□□□ -2.17
MBD3O95983 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.52□□□□□ -2.17
MBD3O95983 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
MBD3O95983 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.52□□□□□ -2.17
MBD3O95983 AC004492.1-201ENST00000607036 742 ntBASIC1.52□□□□□ -2.17
MBD3O95983 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.52□□□□□ -2.17
MBD3O95983 AC022079.1-201ENST00000621546 602 ntBASIC1.52□□□□□ -2.17
MBD3O95983 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
MBD3O95983 AL159152.1-201ENST00000635019 2587 ntBASIC1.52□□□□□ -2.17
MBD3O95983 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
MBD3O95983 RNU4-20P-201ENST00000365601 151 ntBASIC1.51□□□□□ -2.17
MBD3O95983 Y_RNA.381-201ENST00000365666 102 ntBASIC1.51□□□□□ -2.17
MBD3O95983 SNORD116-1-201ENST00000384335 95 ntBASIC1.51□□□□□ -2.17
MBD3O95983 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
MBD3O95983 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
MBD3O95983 ATP5J2P3-201ENST00000451550 258 ntBASIC1.51□□□□□ -2.17
MBD3O95983 MTND3P16-201ENST00000452205 344 ntBASIC1.51□□□□□ -2.17
MBD3O95983 snoU13.15-201ENST00000459407 104 ntBASIC1.51□□□□□ -2.17
MBD3O95983 AC005908.1-201ENST00000468701 347 ntBASIC1.51□□□□□ -2.17
MBD3O95983 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.51□□□□□ -2.17
MBD3O95983 SNORA19.2-201ENST00000516013 114 ntBASIC1.51□□□□□ -2.17
MBD3O95983 AC008269.2-201ENST00000561915 1105 ntBASIC1.51□□□□□ -2.17
MBD3O95983 MIR4524B-201ENST00000581569 115 ntBASIC1.51□□□□□ -2.17
MBD3O95983 AL357078.3-201ENST00000607528 618 ntBASIC1.51□□□□□ -2.17
MBD3O95983 AC092807.2-201ENST00000609367 243 ntBASIC1.51□□□□□ -2.17
MBD3O95983 AL353149.1-201ENST00000610667 244 ntBASIC1.51□□□□□ -2.17
MBD3O95983 Z99129.1-201ENST00000612510 255 ntBASIC1.51□□□□□ -2.17
MBD3O95983 TCL6_2.1-201ENST00000615162 119 ntBASIC1.51□□□□□ -2.17
MBD3O95983 AC137590.2-201ENST00000619709 240 ntBASIC1.51□□□□□ -2.17
MBD3O95983 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
MBD3O95983 RNU6-1019P-201ENST00000364424 107 ntBASIC1.5□□□□□ -2.17
MBD3O95983 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms