Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN1O95832 AC104389.3-201ENST00000445629 235 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 RPL30P15-201ENST00000457129 321 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 RN7SKP210-201ENST00000459176 261 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AC104564.1-201ENST00000493028 407 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AC093303.1-201ENST00000514549 295 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN1O95832 HSPE1P4-201ENST00000550617 308 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AC021231.3-201ENST00000558497 370 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 SUB1P3-201ENST00000564581 315 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 MIR3136-201ENST00000583498 78 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AC044792.1-201ENST00000593294 196 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 HMGB1P24-202ENST00000615653 685 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN1O95832 MIR7515-201ENST00000637837 67 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN1O95832 Z75746.1-201ENST00000440243 2080 ntBASIC2.12□□□□□ -2.07
CLDN1O95832 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN1O95832 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN1O95832 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN1O95832 AC080100.1-201ENST00000624239 5356 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 Y_RNA.146-201ENST00000363549 102 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNU6-1210P-201ENST00000363775 107 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 SNORD115-32-201ENST00000364079 82 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNU6-968P-201ENST00000384076 107 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 Y_RNA.508-201ENST00000384502 114 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNU6-1072P-201ENST00000384703 107 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNU6-331P-201ENST00000384724 107 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNU6-443P-201ENST00000384780 107 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLDN1O95832 CBX3P9-201ENST00000402326 552 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 U6atac.2-201ENST00000408644 118 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNA5SP181-201ENST00000410246 98 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RPS26P42-201ENST00000413485 326 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN1O95832 MTCYBP6-201ENST00000441810 138 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN1O95832 AC080013.2-201ENST00000460866 323 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 AC073901.1-201ENST00000462471 408 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN1O95832 AF186996.7-201ENST00000492781 209 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 HMGB1P35-201ENST00000503360 598 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNU5F-2P-201ENST00000516066 82 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN1O95832 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN1O95832 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.11□□□□□ -2.07
CLDN1O95832 MIR4273-201ENST00000582824 84 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 AL078605.1-201ENST00000603529 500 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 AC080078.3-201ENST00000605407 463 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 AL080274.1-201ENST00000605565 220 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 AC091925.1-201ENST00000623204 462 ntBASIC2.11□□□□□ -2.07
CLDN1O95832 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN1O95832 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN1O95832 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN1O95832 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN1O95832 RNU6-655P-201ENST00000362858 107 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 Y_RNA.112-201ENST00000363250 102 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 SNORA29-201ENST00000384183 140 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 SNORA64-201ENST00000384674 134 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 AC138623.1-201ENST00000418060 216 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 RPL30P4-201ENST00000429309 333 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN1O95832 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN1O95832 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN1O95832 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN1O95832 RNA5SP445-201ENST00000515889 115 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 RNU6-470P-201ENST00000515954 104 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 RNU6-1170P-201ENST00000515974 106 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 SNORA31.16-201ENST00000516773 139 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 Y_RNA.701-201ENST00000516812 110 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 SCARNA3-201ENST00000517097 143 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 RNU1-104P-201ENST00000517280 175 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.1□□□□□ -2.07
CLDN1O95832 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN1O95832 MRPS36P4-201ENST00000534436 298 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN1O95832 MIR4658-201ENST00000584344 65 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 AL356055.1-201ENST00000602528 446 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 AL034555.1-201ENST00000604816 211 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 AC005520.5-201ENST00000613926 164 ntBASIC2.1□□□□□ -2.07
CLDN1O95832 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN1O95832 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN1O95832 AC233981.2-201ENST00000611524 1614 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN1O95832 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CLDN1O95832 RNU6-212P-201ENST00000362642 104 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 Y_RNA.197-201ENST00000364004 102 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 RNU4-9P-201ENST00000364951 139 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 RNU6-142P-201ENST00000384019 107 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 SNORA36A-201ENST00000384221 132 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 Y_RNA.463-201ENST00000384271 102 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 Y_RNA.504-201ENST00000384481 104 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 RNA5SP201-201ENST00000410316 124 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN1O95832 GPM6BP3-201ENST00000442797 145 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AL137792.2-201ENST00000443484 235 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC007677.1-201ENST00000445757 515 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms