Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA1O95477 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA1O95477 7SK.10-201ENST00000621414 298 ntBASIC0.1□□□□□ -2.39
ABCA1O95477 SNORD44.1-201ENST00000363202 61 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 RNU6-348P-201ENST00000384386 107 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 Y_RNA.552-201ENST00000384665 112 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 SNORD12-201ENST00000391002 90 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AF228730.1-201ENST00000397972 663 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 MIR1283-1-201ENST00000408494 87 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC011233.1-201ENST00000422812 283 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.09□□□□□ -2.4
ABCA1O95477 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.09□□□□□ -2.4
ABCA1O95477 AC233266.1-201ENST00000454518 96 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 LINC01399-202ENST00000458450 244 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 RNU6-1102P-201ENST00000516149 96 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.09□□□□□ -2.4
ABCA1O95477 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.09□□□□□ -2.4
ABCA1O95477 AC090049.2-201ENST00000550377 109 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 ZNF321P-202ENST00000550843 495 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.09□□□□□ -2.4
ABCA1O95477 MTRNR2L2-201ENST00000604882 87 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC242852.1-201ENST00000612151 96 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC023158.2-201ENST00000614876 543 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC026585.1-201ENST00000619582 524 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC244015.1-201ENST00000622301 99 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AC112204.3-201ENST00000623822 332 ntBASIC0.09□□□□□ -2.4
ABCA1O95477 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.08□□□□□ -2.4
ABCA1O95477 AC005520.5-201ENST00000613926 164 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 uc_338.34-201ENST00000617467 174 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 SNORD98-201ENST00000636377 67 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 U4.7-201ENST00000638126 106 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 BX322639.1-202ENST00000423987 2213 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
ABCA1O95477 RNU6-212P-201ENST00000362642 104 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 U3.4-201ENST00000363352 213 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 Y_RNA.324-201ENST00000365165 102 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 MIR140-201ENST00000385282 100 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 SNORA75.2-201ENST00000391138 150 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 SNORA75.3-201ENST00000391231 150 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 RNA5SP266-201ENST00000410273 108 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.08□□□□□ -2.4
ABCA1O95477 AC010486.2-201ENST00000505572 483 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 RNU6-922P-201ENST00000516753 99 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.08□□□□□ -2.4
ABCA1O95477 AC024995.1-201ENST00000523014 93 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 LRRC6P1-201ENST00000532188 885 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 ADI1P3-201ENST00000549509 470 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 AC025627.3-201ENST00000582078 182 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 MIR4645-201ENST00000583158 77 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 RSL24D1P11-201ENST00000591045 491 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 AL031281.1-201ENST00000604049 488 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 TCL6_2.1-201ENST00000615162 119 ntBASIC0.08□□□□□ -2.4
ABCA1O95477 RNU6-534P-201ENST00000364877 106 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RNU6-1327P-201ENST00000365302 105 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RNU6-609P-201ENST00000365459 107 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 SNORA36.2-201ENST00000384004 127 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RNA5SP467-201ENST00000391274 118 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RPS26P5-201ENST00000418544 335 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.07□□□□□ -2.4
ABCA1O95477 AC243964.1-201ENST00000441814 261 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 MTCYBP42-201ENST00000444653 1130 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AL031313.1-201ENST00000448435 256 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 U7.7-201ENST00000459276 60 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RNU6-1028P-201ENST00000517164 93 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AC097065.2-201ENST00000608159 533 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.07□□□□□ -2.4
ABCA1O95477 AC134026.1-201ENST00000623249 2239 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
ABCA1O95477 RNU6-792P-201ENST00000363490 107 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RNU6-1141P-201ENST00000364520 107 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 SNORA80D-201ENST00000384488 135 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 MIR604-201ENST00000384880 94 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AL451046.2-201ENST00000403074 277 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RNU2-39P-201ENST00000410604 198 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AC006366.1-201ENST00000422002 759 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.07□□□□□ -2.4
ABCA1O95477 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AC022364.2-201ENST00000457963 554 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AC108740.1-201ENST00000498629 225 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.07□□□□□ -2.4
ABCA1O95477 AC025423.5-201ENST00000550230 219 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AC090888.2-201ENST00000559765 1144 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AC104072.1-201ENST00000568817 668 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AL360219.1-201ENST00000610230 366 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 AC092104.1-201ENST00000497346 1441 ntBASIC0.07□□□□□ -2.4
ABCA1O95477 Y_RNA.48-201ENST00000362710 103 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 Y_RNA.363-201ENST00000365529 113 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 SNORD116-13-201ENST00000384408 92 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 MIR214-201ENST00000385214 110 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 FABP5P4-201ENST00000437203 171 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 SNORD111.1-201ENST00000516421 86 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.06□□□□□ -2.4
ABCA1O95477 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.06□□□□□ -2.4
ABCA1O95477 AL158211.1-201ENST00000566763 763 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 MTND1P15-201ENST00000579262 949 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
ABCA1O95477 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms